RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.88□□□□□ -0.67
PDLIM5-217ENST00000512274 GOLGA4Q13439 2230 aaKnown RBP10.88□□□□□ -0.67
PDLIM5-217ENST00000512274 MYOFQ9NZM1 2061 aa10.88□□□□□ -0.67
PDLIM5-217ENST00000512274 KCNK3O14649 394 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 TLX3O43711 291 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 CALCAP01258 141 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 GLI1P08151 1106 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 PTPN1P18031 435 aaKnown RBP10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 MCM3P25205 808 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 DDX6P26196 483 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 PCK1P35558 622 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SLC6A11P48066 632 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 GPR15P49685 360 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 RWDD2BP57060 319 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SLC8A3P57103 927 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 COPS2P61201 443 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SEMG2Q02383 582 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 GRIK2Q13002 908 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 ZNF77Q15935 545 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 EOGTQ5NDL2 527 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 CCDC181Q5TID7 509 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SDHAF4Q5VUM1 108 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 WSCD1Q658N2 575 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 WDR93Q6P2C0 686 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 OLFML1Q6UWY5 402 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SLC36A4Q6YBV0 504 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SLC26A9Q7LBE3 791 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 GPR155Q7Z3F1 870 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 ACOT1Q86TX2 421 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 MON1AQ86VX9 555 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 RHOT1Q8IXI2 618 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 KATNAL2Q8IYT4 538 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 FUKQ8N0W3 1084 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 GALNT15Q8N3T1 639 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 OR10T2Q8NGX3 314 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 MYCBPAPQ8TBZ2 947 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 ALG3Q92685 438 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 DUSP16Q9BY84 665 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 CSNK1G1Q9HCP0 422 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 ZMYM5Q9UJ78 669 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 EFR3BQ9Y2G0 817 aa10.87□□□□□ -0.67
PDLIM5-217ENST00000512274 MYO18AQ92614 2054 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ANAPC1Q9H1A4 1944 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ZNF487B1APH4 448 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ZNF185O15231 689 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 SART1O43290 800 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ATMINO43313 823 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 SPOPO43791 374 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 SRGAP2O75044 1071 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ADAM23O75077 832 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 KRT3P12035 628 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 HLA-EP13747 358 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 H2AFXP16104 143 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 HMGA1P17096 107 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 GABRG2P18507 467 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 LMO2P25791 158 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 TNFRSF8P28908 595 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ZNF143P52747 638 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 KDSRQ06136 332 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 SRSF1Q07955 248 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 MESDQ14696 234 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 CYP1B1Q16678 543 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 GOLGA7BQ2TAP0 167 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 RAB41Q5JT25 222 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 DCAF12L1Q5VU92 463 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 BEND5Q7L4P6 421 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 METTL23Q86XA0 190 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ARL14EPQ8N8R7 260 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 C12orf29Q8N999 325 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 EXD1Q8NHP7 514 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 MAIP1Q8WWC4 291 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 FUBP3Q96I24 572 aaKnown RBP eCLIP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 RUNDC3BQ96NL0 473 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 SYT15Q9BQS2 421 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 GOLPH3Q9H4A6 298 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 GAREM1Q9H706 876 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 DDX43Q9NXZ2 648 aaKnown RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 ABI2Q9NYB9 513 aaPredicted RBP10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 CALCOCO1Q9P1Z2 691 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 CYP8B1Q9UNU6 501 aa10.86□□□□□ -0.67
PDLIM5-217ENST00000512274 IGHV1OR15-9A0A0B4J2B8 117 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 TEX51A0A1B0GUA7 166 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CAPN8A6NHC0 703 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 C2CD4BA6NLJ0 364 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 RRP8O43159 456 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 NDUFS2O75306 463 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 FBXO21O94952 628 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CKMP06732 381 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 HAPLN1P10915 354 aaPredicted RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 WASP42768 502 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 PTPN9P43378 593 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 CXADRP78310 365 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 SLC6A3Q01959 620 aa10.85□□□□□ -0.67
PDLIM5-217ENST00000512274 PDE4CQ08493 712 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms