RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 INVSQ9Y283 1065 aa12.09□□□□□ -0.47
HMGXB3-203ENST00000510472 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 SYNCRIPO60506 623 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 MOCS3O95396 460 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 IGLV3-19P01714 112 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 EPHX1P07099 455 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 L1CAMP32004 1257 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 SULT2A1Q06520 285 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 SEMA3BQ13214 749 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 STARD3Q14849 445 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 LPAL2Q16609 132 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 HNRNPA1L2Q32P51 320 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 ARL13BQ3SXY8 428 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 FNDC3BQ53EP0 1204 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 TDRD12Q587J7 1177 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 PMS2CLQ68D20 193 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 ALKBH5Q6P6C2 394 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 PRR23BQ6ZRT6 265 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 CYP4V2Q6ZWL3 525 aaPredicted RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 CEP68Q76N32 757 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 TMC6Q7Z403 805 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 SLFN11Q7Z7L1 901 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 C11orf74Q86VG3 221 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 TMPRSS6Q8IU80 811 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 OR2T3Q8NH03 318 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 FRS2Q8WU20 508 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 TRIM11Q96F44 468 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 PPP1R9BQ96SB3 815 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 PSMB7Q99436 277 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 ZYG11BQ9C0D3 744 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 USP36Q9P275 1121 aaKnown RBP12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 SUN2Q9UH99 717 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 RAB23Q9ULC3 237 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 FZD10Q9ULW2 581 aa12.08□□□□□ -0.48
HMGXB3-203ENST00000510472 IGHV1OR15-9A0A0B4J2B8 117 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 A0A0D9SEW6 157 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 SSU72P8A0A1W2PR75 194 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ILVBLA1L0T0 632 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ANKRD62A6NC57 917 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 TTC34A8MYJ7 566 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 SRGAP2O75044 1071 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 MFAP3LO75121 409 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF217O75362 1048 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 LRIG2O94898 1065 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 EPN2O95208 641 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 CYP1A2P05177 515 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 RHOQP17081 205 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 EIF4A3P38919 411 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 AIF1P55008 147 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ADKP55263 362 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 BYSLQ13895 437 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 SLC18A3Q16572 532 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 SPDYCQ5MJ68 293 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 PLA2G2CQ5R387 149 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 C9orf64Q5T6V5 341 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 RNF219Q5W0B1 726 aaPredicted RBP12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF783Q6ZMS7 281 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 VPS36Q86VN1 386 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 PYROXD2Q8N2H3 581 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF366Q8N895 744 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF653Q96CK0 615 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 CHP1Q99653 195 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 THAP2Q9H0W7 228 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 MTG2Q9H4K7 406 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 FBRSQ9HAH7 460 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 PARD6AQ9NPB6 346 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 ABHD10Q9NUJ1 306 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 BCCIPQ9P287 314 aaKnown RBP eCLIP12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 FRYLO94915 3013 aa12.07□□□□□ -0.48
HMGXB3-203ENST00000510472 SDK1Q7Z5N4 2213 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 TARSL2A2RTX5 802 aaKnown RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 ZBTB24O43167 697 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 ATP9BO43861 1147 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 LRP3O75074 770 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 ZMPSTE24O75844 475 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 RHOBTB1O94844 696 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 RHOCP08134 193 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 PSMA2P25787 234 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 STK19P49842 368 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 GALCP54803 685 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 ZBTB16Q05516 673 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 CCDC122Q5T0U0 273 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 SCYL2Q6P3W7 929 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 TFAP2DQ7Z6R9 452 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 PTPRN2Q92932 1015 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 ARHGEF26Q96DR7 871 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 SIPA1Q96FS4 1042 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 RPL10LQ96L21 214 aaKnown RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 PEBP4Q96S96 227 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 FAM129BQ96TA1 746 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 ACE2Q9BYF1 805 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 TRIM5Q9C035 493 aa12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 RSPH9Q9H1X1 276 aaPredicted RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 MRPL47Q9HD33 250 aaKnown RBP12.06□□□□□ -0.48
HMGXB3-203ENST00000510472 CD93Q9NPY3 652 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms