RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RNF139Q8WU17 664 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 FETUBQ9UGM5 382 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 KIAA1257Q9ULG3 409 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 UBA6A0AVT1 1052 aaPredicted RBP15.2■□□□□ 0.02
USP38-202ENST00000510377 TMCC1O94876 653 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 C2P06681 752 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 GFAPP14136 432 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 HNRNPLP14866 589 aaKnown RBP eCLIP15.2■□□□□ 0.02
USP38-202ENST00000510377 RPL14P50914 215 aaKnown RBP15.2■□□□□ 0.02
USP38-202ENST00000510377 FAM83EQ2M2I3 478 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 FUT11Q495W5 492 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 CPNE1Q99829 537 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 ADNPQ9H2P0 1102 aa15.2■□□□□ 0.02
USP38-202ENST00000510377 IPO11Q9UI26 975 aaKnown RBP15.2■□□□□ 0.02
USP38-202ENST00000510377 TIMM13Q9Y5L4 95 aaPredicted RBP15.2■□□□□ 0.02
USP38-202ENST00000510377 MYO18AQ92614 2054 aaKnown RBP15.2■□□□□ 0.02
USP38-202ENST00000510377 C2CD4BA6NLJ0 364 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 CILPO75339 1184 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 STMN1P16949 149 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 BCAT1P54687 386 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 PPM1LQ5SGD2 360 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 CERCAMQ5T4B2 595 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 C15orf39Q6ZRI6 1047 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 PPHLN1Q8NEY8 458 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 CLEC4CQ8WTT0 213 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 DDI1Q8WTU0 396 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 RRAGCQ9HB90 399 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 MRPL40Q9NQ50 206 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 NFASCO94856 1347 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 RFPL1O75677 317 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 ATICP31939 592 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 ETFBP38117 255 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 MAP3K7CLP57077 242 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 PRKAA1Q13131 559 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 STX5Q13190 355 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 CSPG4P5Q96PW8 444 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 MAGEB5Q9BZ81 275 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 SPC25Q9HBM1 224 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 ITGA11Q9UKX5 1188 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 C10orf71Q711Q0 1435 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 DDX60Q8IY21 1712 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 STX16-NPEPL1H3BU86 382 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 DDHD2O94830 711 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 RAP1GDS1P52306 607 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 UGP2Q16851 508 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 SLC41A1Q8IVJ1 513 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 SCN4BQ8IWT1 228 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 NIPA2Q8N8Q9 360 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 DGCR14Q96DF8 476 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 MFSD3Q96ES6 412 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 ZNF670Q9BS34 389 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 CDH19Q9H159 772 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 KCNK13Q9HB14 408 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 SARS2Q9NP81 518 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 ZNF180Q9UJW8 692 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 PSAT1Q9Y617 370 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 SMIM31A0A1B0GVY4 71 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 RGSL1A5PLK6 1076 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 NR5A2O00482 541 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 HOXC6P09630 235 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 TEDDM1Q5T9Z0 273 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 PABPC5Q96DU9 382 aaKnown RBP15.19■□□□□ 0.02
USP38-202ENST00000510377 AGAP2Q99490 1192 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 PSMD13Q9UNM6 376 aa15.19■□□□□ 0.02
USP38-202ENST00000510377 ZNF839A8K0R7 811 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 TK2O00142 265 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 HDAC3O15379 428 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 FARP2O94887 1054 aaPredicted RBP15.18■□□□□ 0.02
USP38-202ENST00000510377 CHRNGP07510 517 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 MAP4P27816 1152 aaKnown RBP15.18■□□□□ 0.02
USP38-202ENST00000510377 NR2C2P49116 596 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 CCNG1P51959 295 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 PGGT1BP53609 377 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 BST2Q10589 180 aaKnown RBP15.18■□□□□ 0.02
USP38-202ENST00000510377 RALGDSQ12967 914 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 SLC9B1Q4ZJI4 515 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 GPR141Q7Z602 305 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 DSELQ8IZU8 1212 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 SIKE1Q9BRV8 207 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 MFHAS1Q9Y4C4 1052 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 GAS2O43903 313 aaKnown RBP15.18■□□□□ 0.02
USP38-202ENST00000510377 MFSD11O43934 449 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 ADORA2AP29274 412 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 GPD2P43304 727 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 CTBP1Q13363 440 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 NAPEPLDQ6IQ20 393 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 CAND1Q86VP6 1230 aaKnown RBP15.18■□□□□ 0.02
USP38-202ENST00000510377 MYO1HQ8N1T3 1032 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 ATPAF2Q8N5M1 289 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 CCDC185Q8N715 623 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 TRIM15Q9C019 465 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 SUN2Q9UH99 717 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 ARAP2Q8WZ64 1704 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 DDX60LQ5H9U9 1706 aaKnown RBP15.18■□□□□ 0.02
USP38-202ENST00000510377 UBDO15205 165 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 EGFRP00533 1210 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 ACADSBP45954 432 aa15.18■□□□□ 0.02
USP38-202ENST00000510377 REPS2Q8NFH8 660 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms