RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 CEP128Q6ZU80 1094 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 PCGF5Q86SE9 256 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 C14orf80Q86SX3 495 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 ARID3BQ8IVW6 561 aaPredicted RBP17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 NPAS3Q8IXF0 933 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 CCNYQ8ND76 341 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 NSMCE1Q8WV22 266 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 SEC14L1Q92503 715 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 SMARCD2Q92925 531 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 TMA16Q96EY4 203 aaKnown RBP17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 TSGA13Q96PP4 275 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 TMEM121Q9BTD3 319 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 MAGEB5Q9BZ81 275 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 TSPYL1Q9H0U9 437 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 MAGEH1Q9H213 219 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 ANKZF1Q9H8Y5 726 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 TRPV4Q9HBA0 871 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 ETNK2Q9NVF9 386 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 CLDND1Q9NY35 253 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 PAK5Q9P286 719 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 SAE1Q9UBE0 346 aaPredicted RBP17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 SNX10Q9Y5X0 201 aa17.17■□□□□ 0.34
SCAMP1-203ENST00000510030 MYO9BQ13459 2157 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 TNFRSF10AO00220 468 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 KCNN4O15554 427 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 GREM1O60565 184 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 KRT14P02533 472 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 CCNCP24863 283 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 SLC6A4P31645 630 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 KCNJ1P48048 391 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 RBM10P98175 930 aaKnown RBP17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 BRD3Q15059 726 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 AFMIDQ63HM1 303 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 TDRD5Q8NAT2 981 aaKnown RBP17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 FGF13Q92913 245 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 IGSF8Q969P0 613 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 SNF8Q96H20 258 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 MPP6Q9NZW5 540 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 WHRNQ9P202 907 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 TRHDEQ9UKU6 1024 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 RAB21Q9UL25 225 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 CDH7Q9ULB5 785 aa17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 V9GYY5 206 aaPredicted RBP17.16■□□□□ 0.34
SCAMP1-203ENST00000510030 TTC28Q96AY4 2481 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 CXorf51AA0A1B0GTR3 108 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ILVBLA1L0T0 632 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 CCDC151A5D8V7 595 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 C5orf60A6NFR6 353 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 LINC01565O15544 149 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 OPHN1O60890 802 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 IFNB1P01574 187 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ITIH2P19823 946 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ADCY8P40145 1251 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 AP1B1Q10567 949 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 CDH18Q13634 790 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 POLD3Q15054 466 aaPredicted RBP17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ITPRIPL1Q6GPH6 555 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 GET4Q7L5D6 327 aaPredicted RBP17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 TFAP2DQ7Z6R9 452 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 CCDC13Q8IYE1 715 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 NPWQ8N729 165 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ITFG1Q8TB96 612 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ATXN2LQ8WWM7 1075 aaKnown RBP17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 ING5Q8WYH8 240 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 FAM118BQ9BPY3 351 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 EPB41L5Q9HCM4 733 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 GDF3Q9NR23 364 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 HPCAL4Q9UM19 191 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 TBC1D30Q9Y2I9 924 aa17.15■□□□□ 0.34
SCAMP1-203ENST00000510030 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 ZSCAN5CA6NGD5 496 aaPredicted RBP17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 DFFAO00273 331 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 GFRA2O00451 464 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 GCATO75600 419 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 NEBLO76041 1014 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 SLC10A2Q12908 348 aaPredicted RBP17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 SLC12A1Q13621 1099 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 ALFQ53S48 1182 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 DUPD1Q68J44 220 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 RFWD3Q6PCD5 774 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 ARHGEF18Q6ZSZ5 1173 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 BBS7Q8IWZ6 715 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 BBS5Q8N3I7 341 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 FAM71DQ8N9W8 422 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 DDI1Q8WTU0 396 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 PRICKLE1Q96MT3 831 aaPredicted RBP17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 ZNF599Q96NL3 588 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 ASB16Q96NS5 453 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 PARD6BQ9BYG5 372 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 FOXP3Q9BZS1 431 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 KLC2Q9H0B6 622 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 CLEC1BQ9P126 229 aa17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 MTRF1LQ9UGC7 380 aaKnown RBP17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 DMGDHQ9UI17 866 aaKnown RBP17.14■□□□□ 0.33
SCAMP1-203ENST00000510030 TCF20Q9UGU0 1960 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms