RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 LIMK2P53671 638 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 SEMA3BQ13214 749 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 OLIG2Q13516 323 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 FRG1Q14331 258 aaKnown RBP18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 CMC1Q7Z7K0 106 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 TMEM135Q86UB9 458 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 NRG4Q8WWG1 115 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 ISL2Q96A47 359 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 ZFP42Q96MM3 310 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 SYT15Q9BQS2 421 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 TSPYL2Q9H2G4 693 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 CASS4Q9NQ75 786 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 CRTAC1Q9NQ79 661 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 SLC38A7Q9NVC3 462 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 DDIT4Q9NX09 232 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 RRN3Q9NYV6 651 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 HAS3O00219 553 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 ZBTB24O43167 697 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 MAP3K7O43318 606 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 F9P00740 461 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 MPOP05164 745 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 PDHA1P08559 390 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 KLC1Q07866 573 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 ITGA9Q13797 1035 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 ANKRD20A4Q4UJ75 823 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 RABGAP1LQ5R372 815 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 C1orf146Q5VVC0 180 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 RIPOR1Q6ZS17 1223 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 FAM35AQ86V20 835 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 TMEM86AQ8N2M4 240 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 SPDL1Q96EA4 605 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 PGAP3Q96FM1 320 aaPredicted RBP18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 ATXN7L3BQ96GX2 97 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 SORT1Q99523 831 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 GBA3Q9H227 469 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 PNPOQ9NVS9 261 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 LRCH1Q9Y2L9 728 aa18.34■□□□□ 0.53
CCHCR1-228ENST00000509552 LTFP02788 710 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 C6orf222P0C671 652 aaPredicted RBP18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 SERPINB6P35237 376 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 MAGEA12P43365 314 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 NPY2RP49146 381 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 HARS2P49590 506 aaKnown RBP18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 IDH3AP50213 366 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 ACTR3P61158 418 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 IRF5Q13568 498 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 OLFML2BQ68BL8 750 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 LENG1Q96BZ8 264 aaPredicted RBP18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 HDAC11Q96DB2 347 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 CLPTM1LQ96KA5 538 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 VAT1Q99536 393 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 EPAS1Q99814 870 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 SMOQ99835 787 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 GORASP1Q9BQQ3 440 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 SLC7A8Q9UHI5 535 aa18.33■□□□□ 0.53
CCHCR1-228ENST00000509552 SIN3BO75182 1162 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 USP17L7P0C7H9 530 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 GNAT1P11488 350 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 CYP2B6P20813 491 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF135P52742 658 aaPredicted RBP18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 AP2B1P63010 937 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 FSTL4Q6MZW2 842 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 PANX3Q96QZ0 392 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 KATNAL1Q9BW62 490 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 ANLNQ9NQW6 1124 aa18.33■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF638Q14966 1978 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 ZCWPW2A0A1B0GU75 182 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 E2F8A0AVK6 867 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 TIMM44O43615 452 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 ATP9BO43861 1147 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 ALOX15P16050 662 aaPredicted RBP18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 RABGGTBP53611 331 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 COPAP53621 1224 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 KCTD11Q693B1 232 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 PCED1BQ96HM7 432 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 KCNK16Q96T55 309 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 COLEC11Q9BWP8 271 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 AP5M1Q9H0R1 490 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 WDCPQ9H6R7 721 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF358Q9NW07 568 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 CLEC11AQ9Y240 323 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 CDY2AQ9Y6F7 541 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 CDY1Q9Y6F8 540 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 TSC2P49815 1807 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 A0A096LPK6 155 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 A6NHS1 94 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 EIF4E1BA6NMX2 242 aaKnown RBP18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 AP3B1O00203 1094 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 PAX7P23759 505 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 CPOXP36551 454 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 PRPSAP1Q14558 356 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 HSP90AA5PQ58FG0 334 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 RAB41Q5JT25 222 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 CFAP157Q5JU67 520 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 PDPK2PQ6A1A2 396 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 IRGCQ6NXR0 463 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 MAVSQ7Z434 540 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 NPWQ8N729 165 aa18.32■□□□□ 0.52
CCHCR1-228ENST00000509552 PGLYRP2Q96PD5 576 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms