RNA–Protein interactions for RNA: ENST00000509517.1

OTUD4-207, Transcript of OTU deubiquitinase 4, humanhuman

TSL 3

Gene OTUD4, Length 617 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-207ENST00000509517 PCDHGB3Q9Y5G1 929 aa3.68□□□□□ -1.82
OTUD4-207ENST00000509517 ARID4BQ4LE39 1312 aaPredicted RBP3.68□□□□□ -1.82
OTUD4-207ENST00000509517 NPIPB13A6NJU9 1138 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 NPIPB5A8MRT5 1133 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 B9A039 149 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 NPIPB4C9JG80 1138 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 F8W810 466 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 IRAK2O43187 625 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 UGDHO60701 494 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 KRT38O76015 456 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 TK1P04183 234 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 WNT1P04628 370 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 CYP19A1P11511 503 aaPredicted RBP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 PRPH2P23942 346 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 ARL4CP56559 192 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 CDK18Q07002 472 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 SRSF1Q07955 248 aaKnown RBP eCLIP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 DHX8Q14562 1220 aaKnown RBP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 TAF5Q15542 800 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 LRRC24Q50LG9 513 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 SHC4Q6S5L8 630 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 DLK2Q6UY11 383 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 RASGRP2Q7LDG7 609 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 PIP4P1Q86T03 277 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 ANKRD13BQ86YJ7 626 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 MORC4Q8TE76 937 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 KTI12Q96EK9 354 aaPredicted RBP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 ADAD1Q96M93 576 aaKnown RBP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 ITM2CQ9NQX7 267 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 IPO11Q9UI26 975 aaKnown RBP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 FEM1BQ9UK73 627 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 SLC8A2Q9UPR5 921 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 GPR52Q9Y2T5 361 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 PKP3Q9Y446 797 aa3.67□□□□□ -1.82
OTUD4-207ENST00000509517 ZNF335Q9H4Z2 1342 aaPredicted RBP3.67□□□□□ -1.82
OTUD4-207ENST00000509517 TRBV5-3A0A0A0MS03 114 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 PLEKHD1A6NEE1 506 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 KCNJ18B7U540 433 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 PPEF2O14830 753 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 EIF3JO75822 258 aaKnown RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 FGBP02675 491 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 LYL1P12980 280 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 KRT10P13645 584 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 ACP5P13686 325 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 CHN1P15882 459 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 AARSP49588 968 aaKnown RBP eCLIP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 CCT4P50991 539 aaKnown RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 RBM5P52756 815 aaKnown RBP eCLIP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 ACTR2P61160 394 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 SEMA3AQ14563 771 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 RABEP1Q15276 862 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 RBMS2Q15434 407 aaKnown RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 ADCK5Q3MIX3 580 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 MIDNQ504T8 468 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 ARL13AQ5H913 290 aaPredicted RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 C10orf76Q5T2E6 689 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 PXDC1Q5TGL8 231 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 LRIG3Q6UXM1 1119 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 TMEM200AQ86VY9 491 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 DDIASQ8IXT1 998 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 FTSJ3Q8IY81 847 aaKnown RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 EXOC8Q8IYI6 725 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 NANOGP1Q8N7R0 232 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 FSIP1Q8NA03 581 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 FAM110DQ8TAY7 271 aaPredicted RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 AFG1LQ8WV93 481 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 IP6K1Q92551 441 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 KAT2AQ92830 837 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 PSMD1Q99460 953 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 TMEM79Q9BSE2 394 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 TUBB6Q9BUF5 446 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 HERC2P3Q9BVR0 1158 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 HDHD5Q9BXW7 423 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 PLEKHA2Q9HB19 425 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 IL21RQ9HBE5 538 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 HEY2Q9UBP5 337 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 AGO2Q9UKV8 859 aaKnown RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 DTX4Q9Y2E6 619 aa3.66□□□□□ -1.82
OTUD4-207ENST00000509517 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 TTBK1Q5TCY1 1321 aaPredicted RBP3.66□□□□□ -1.82
OTUD4-207ENST00000509517 A0A0G2JK05 382 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 KIR2DS5A0A0G2JLQ3 304 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 CXorf65A6NEN9 183 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 KIR2DS3K7RE56 304 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 TLX3O43711 291 aaPredicted RBP3.65□□□□□ -1.83
OTUD4-207ENST00000509517 CSF1P09603 554 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 PRF1P14222 555 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 PKMP14618 531 aaKnown RBP3.65□□□□□ -1.83
OTUD4-207ENST00000509517 RHAGQ02094 409 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 ZBTB16Q05516 673 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 MTX1Q13505 466 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 KRTAP27-1Q3LI81 207 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 GXYLT1Q4G148 440 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 ZNF484Q5JVG2 852 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 ISM2Q6H9L7 571 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 MTFR2Q6P444 385 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 SLC30A9Q6PML9 568 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 ANKS1BQ7Z6G8 1248 aa3.65□□□□□ -1.83
OTUD4-207ENST00000509517 KLBQ86Z14 1044 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms