RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SERGEFQ9UGK8 458 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 USP24Q9UPU5 2620 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 CKAP5Q14008 2032 aa15.87■□□□□ 0.13
TPM3-219ENST00000509409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 A0A1B0GVM2 712 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 A0A1W2PPC4 97 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 TCAF2A6NFQ2 919 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 ADH1BP00325 375 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 IGHV4-34P06331 123 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 GOT1P17174 413 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 BPIFB4P59827 614 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 RNASE9P60153 205 aaKnown RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 RACK1P63244 317 aaKnown RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 SLC6A3Q01959 620 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 ZNF177Q13360 481 aaPredicted RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 EIF4EBP2Q13542 120 aaPredicted RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 AUHQ13825 339 aaKnown RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 MAN2A1Q16706 1144 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 FBXL22Q6P050 247 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 DBX2Q6ZNG2 339 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 GLRX5Q86SX6 157 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 SLC47A2Q86VL8 602 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 PTPRN2Q92932 1015 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 IGSF8Q969P0 613 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 SIK2Q9H0K1 926 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 PLCB1Q9NQ66 1216 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 AASDHPPTQ9NRN7 309 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 RALYQ9UKM9 306 aaKnown RBP15.86■□□□□ 0.13
TPM3-219ENST00000509409 VANGL2Q9ULK5 521 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 ITIH6Q6UXX5 1313 aa15.86■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3DA0A087WVF3 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3IA0A087WXS9 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3EA0A087X179 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3KA0A087X1G2 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3FA6NER0 549 aaPredicted RBP15.85■□□□□ 0.13
TPM3-219ENST00000509409 SRRM3A6NNA2 597 aaPredicted RBP15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3LB9A6J9 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 H0Y8X5 98 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 M0QYT0 321 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 ERBB2P04626 1255 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3HP0C7X1 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 PNMA6AP0CW24 399 aaPredicted RBP15.85■□□□□ 0.13
TPM3-219ENST00000509409 ZNF18P17022 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 C5AR1P21730 350 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 NOS2P35228 1153 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 CLCN1P35523 988 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 CCT8P50990 548 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 IL9RQ01113 521 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 MTA1Q13330 715 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 VWA3BQ502W6 1294 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 HSP90AA4PQ58FG1 418 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 KCNT1Q5JUK3 1230 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3GQ6DHY5 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3CQ6IPX1 549 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 TBC1D3Q8IZP1 549 aaPredicted RBP15.85■□□□□ 0.13
TPM3-219ENST00000509409 SLC6A18Q96N87 628 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 NDST4Q9H3R1 872 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 SIX2Q9NPC8 291 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 CHMP5Q9NZZ3 219 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 ADAMTS1Q9UHI8 967 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 SLC25A13Q9UJS0 675 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 AJAP1Q9UKB5 411 aaPredicted RBP15.85■□□□□ 0.13
TPM3-219ENST00000509409 FZD4Q9ULV1 537 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 BTBD3Q9Y2F9 522 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 NUMA1Q14980 2115 aa15.85■□□□□ 0.13
TPM3-219ENST00000509409 VILLO15195 856 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 DFNA5O60443 496 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 DAB1O75553 588 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 ATXN1LP0C7T5 689 aaKnown RBP15.84■□□□□ 0.13
TPM3-219ENST00000509409 VAV1P15498 845 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 CTSKP43235 329 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 GRK6P43250 576 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 PLK1P53350 603 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 CENPCQ03188 943 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 ELAVL3Q14576 367 aaKnown RBP15.84■□□□□ 0.13
TPM3-219ENST00000509409 CCDC157Q569K6 752 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 PRAMEF14Q5SWL7 426 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 OLFML1Q6UWY5 402 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 C14orf80Q86SX3 495 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 AADATQ8N5Z0 425 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 TMEM35BQ8NCS4 154 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 ORAI3Q9BRQ5 295 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 TUBGCP2Q9BSJ2 902 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 CLSTN2Q9H4D0 955 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 WDCPQ9H6R7 721 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.84■□□□□ 0.13
TPM3-219ENST00000509409 DACH1Q9UI36 760 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 HS3ST4Q9Y661 456 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 ZFHX4Q86UP3 3567 aa15.84■□□□□ 0.13
TPM3-219ENST00000509409 BNIP3LO60238 219 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 PAGE1O75459 146 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 CLDN11O75508 207 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 CD38P28907 300 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 GGCXP38435 758 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 CCR5P51681 352 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 SCAPQ12770 1279 aa15.83■□□□□ 0.12
TPM3-219ENST00000509409 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.12
TPM3-219ENST00000509409 INAVAQ3KP66 663 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms