RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ADCY5O95622 1261 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 CALB1P05937 261 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 ATP1A3P13637 1013 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 FERP16591 822 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 SDC4P31431 198 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 PLK1P53350 603 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 DCAF12L1Q5VU92 463 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 SLC30A5Q8TAD4 765 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 SNX19Q92543 992 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 MYO19Q96H55 970 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 RPL10LQ96L21 214 aaKnown RBP19.2■□□□□ 0.66
UBE3D-207ENST00000509102 MRGPRX3Q96LB0 322 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 C1orf74Q96LT6 269 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 CFAP57Q96MR6 1250 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 C11orf70Q9BRQ4 267 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 MUC3BQ9H195 1237 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 MIR1-1HGQ9H1L0 117 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 SGK2Q9HBY8 427 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 ADAM22Q9P0K1 906 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 TMEM59LQ9UK28 342 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 TNRC6BQ9UPQ9 1833 aaKnown RBP19.2■□□□□ 0.66
UBE3D-207ENST00000509102 ITIH6Q6UXX5 1313 aa19.2■□□□□ 0.66
UBE3D-207ENST00000509102 GON4LQ3T8J9 2241 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 A0A1B0GTW7 788 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 METTL12A8MUP2 240 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 DESP17661 470 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 CHRNB2P17787 502 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 TFE3P19532 575 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-207ENST00000509102 MZF1P28698 734 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-207ENST00000509102 GGCXP38435 758 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 CTSOP43234 321 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-207ENST00000509102 KRT83P78385 493 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 OTUD1Q5VV17 481 aaPredicted RBP19.19■□□□□ 0.66
UBE3D-207ENST00000509102 CXorf57Q6NSI4 855 aaKnown RBP19.19■□□□□ 0.66
UBE3D-207ENST00000509102 USP30Q70CQ3 517 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 DSG4Q86SJ6 1040 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 DNASE2BQ8WZ79 361 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 HAPLN3Q96S86 360 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 OMDQ99983 421 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 SELENOOQ9BVL4 669 aa19.19■□□□□ 0.66
UBE3D-207ENST00000509102 TTC34A8MYJ7 566 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 ARHGAP33O14559 1287 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 CDX4O14627 284 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 TM4SF5O14894 197 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 SEMA4FO95754 770 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 RHOCP08134 193 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 C7P10643 843 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 KRT3P12035 628 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 UNGP13051 313 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 MAOBP27338 520 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 ATP11AP98196 1134 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 ELAVL3Q14576 367 aaKnown RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 CST6Q15828 149 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 CLEC16AQ2KHT3 1053 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 C5orf22Q49AR2 442 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 ACCSLQ4AC99 568 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 C6orf118Q5T5N4 469 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 C9orf64Q5T6V5 341 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 PPP1R2P3Q6NXS1 205 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 APTXQ7Z2E3 356 aaKnown RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 SETD3Q86TU7 594 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 FAM131BQ86XD5 332 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 AGPAT1Q99943 283 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 FEM1AQ9BSK4 669 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 C2orf49Q9BVC5 232 aaPredicted RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 ZDHHC5Q9C0B5 715 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 HSD3B7Q9H2F3 369 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 PABPC3Q9H361 631 aaKnown RBP19.18■□□□□ 0.66
UBE3D-207ENST00000509102 MTG2Q9H4K7 406 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 SLC32A1Q9H598 525 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 CAPN10Q9HC96 672 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 FBXL12Q9NXK8 326 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 SLCO3A1Q9UIG8 710 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 MYO6Q9UM54 1294 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 TBC1D30Q9Y2I9 924 aa19.18■□□□□ 0.66
UBE3D-207ENST00000509102 E9PAM4 449 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 OPHN1O60890 802 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 SRGAP2O75044 1071 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 ADH1BP00325 375 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 ACSL1P33121 698 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 STK19P49842 368 aaPredicted RBP19.17■□□□□ 0.66
UBE3D-207ENST00000509102 NOVA1P51513 510 aaKnown RBP19.17■□□□□ 0.66
UBE3D-207ENST00000509102 CDO1Q16878 200 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 KLHL40Q2TBA0 621 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 C14orf80Q86SX3 495 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 PHF13Q86YI8 300 aaPredicted RBP19.17■□□□□ 0.66
UBE3D-207ENST00000509102 MMAAQ8IVH4 418 aaKnown RBP19.17■□□□□ 0.66
UBE3D-207ENST00000509102 ZCCHC9Q8N567 271 aaKnown RBP19.17■□□□□ 0.66
UBE3D-207ENST00000509102 EMC1Q8N766 993 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 RXFP2Q8WXD0 754 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 CCDC114Q96M63 670 aa19.17■□□□□ 0.66
UBE3D-207ENST00000509102 RTN4Q9NQC3 1192 aaKnown RBP19.17■□□□□ 0.66
UBE3D-207ENST00000509102 BCAT2O15382 392 aaPredicted RBP19.16■□□□□ 0.66
UBE3D-207ENST00000509102 RNASEH2AO75792 299 aaKnown RBP19.16■□□□□ 0.66
UBE3D-207ENST00000509102 KCNK5O95279 499 aa19.16■□□□□ 0.66
UBE3D-207ENST00000509102 SERPINC1P01008 464 aa19.16■□□□□ 0.66
UBE3D-207ENST00000509102 ADRB1P08588 477 aa19.16■□□□□ 0.66
UBE3D-207ENST00000509102 OR1E1P30953 314 aa19.16■□□□□ 0.66
UBE3D-207ENST00000509102 PSMD8P48556 350 aa19.16■□□□□ 0.66
UBE3D-207ENST00000509102 VASPP50552 380 aaPredicted RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms