RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 ATG14Q6ZNE5 492 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 CATSPER4Q7RTX7 472 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 CLEC14AQ86T13 490 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 TMEM135Q86UB9 458 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 HPS6Q86YV9 775 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 PHTF2Q8N3S3 785 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 ZNF781Q8N8C0 355 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 TDRD5Q8NAT2 981 aaKnown RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 SHCBP1Q8NEM2 672 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 APPL2Q8NEU8 664 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 OR52K1Q8NGK4 314 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 FCRL3Q96P31 734 aaPredicted RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 SHCBP1LQ9BZQ2 653 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 TCF7L2Q9NQB0 619 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 GDAP2Q9NXN4 497 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 PPP1R1BQ9UD71 204 aaPredicted RBP13.34□□□□□ -0.27
CAST-223ENST00000508608 BCAP29Q9UHQ4 241 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 SLC4A7Q9Y6M7 1214 aa13.34□□□□□ -0.27
CAST-223ENST00000508608 PLXNB2O15031 1838 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 LOC100653049A0A140TA62 436 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 MAGEB16A2A368 324 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 H3BRB1 525 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 MTSS1O43312 755 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 KRT34O76011 436 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 THRAP10827 490 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 CYP2C9P11712 490 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 PEX2P28328 305 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 NUMBP49757 651 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 PRKAA2P54646 552 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 CDC42EP1Q00587 391 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 PCBP1Q15365 356 aaKnown RBP eCLIP13.33□□□□□ -0.27
CAST-223ENST00000508608 SFT2D3Q587I9 215 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 TCHHL1Q5QJ38 904 aaPredicted RBP13.33□□□□□ -0.27
CAST-223ENST00000508608 GJC2Q5T442 439 aaPredicted RBP13.33□□□□□ -0.27
CAST-223ENST00000508608 LPCAT4Q643R3 524 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 SETD3Q86TU7 594 aaPredicted RBP13.33□□□□□ -0.27
CAST-223ENST00000508608 KBTBD6Q86V97 674 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 TNS4Q8IZW8 715 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 DNAAF3Q8N9W5 541 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 SHKBP1Q8TBC3 707 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 URGCPQ8TCY9 931 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 NT5C3BQ969T7 300 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 AZIN2Q96A70 460 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 TSNARE1Q96NA8 513 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 NPY6RQ99463 290 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 C16orf70Q9BSU1 422 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 SPATA16Q9BXB7 569 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 ILKAPQ9H0C8 392 aaPredicted RBP13.33□□□□□ -0.27
CAST-223ENST00000508608 BRD8Q9H0E9 1235 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 TUT1Q9H6E5 874 aaKnown RBP13.33□□□□□ -0.27
CAST-223ENST00000508608 VCX3AQ9NNX9 186 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 ZNF358Q9NW07 568 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 NSMCE4AQ9NXX6 385 aa13.33□□□□□ -0.27
CAST-223ENST00000508608 C6orf203Q9P0P8 240 aaPredicted RBP13.33□□□□□ -0.27
CAST-223ENST00000508608 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
CAST-223ENST00000508608 E9PBE3 544 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 G3V2L1 256 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 M0QYT0 321 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 PIRO00625 290 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 HCRTO43612 131 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 KLHL41O60662 606 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 AQP4P55087 323 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 USP4Q13107 963 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 GRM2Q14416 872 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 LRRC36Q1X8D7 754 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 MMEL1Q495T6 779 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 GLRA4Q5JXX5 417 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 ITPRIPL1Q6GPH6 555 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 TAPT1Q6NXT6 567 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 RNF111Q6ZNA4 994 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 BNIPLQ7Z465 357 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 PIGZQ86VD9 579 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 LCA5Q86VQ0 697 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 STON2Q8WXE9 905 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 CNDP1Q96KN2 507 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 TSPAN18Q96SJ8 248 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 CXCL16Q9H2A7 254 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 NMRAL1Q9HBL8 299 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 DMAP1Q9NPF5 467 aaPredicted RBP13.33□□□□□ -0.28
CAST-223ENST00000508608 CASS4Q9NQ75 786 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.28
CAST-223ENST00000508608 AP3B1O00203 1094 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 DCLK1O15075 740 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 ADCY6O43306 1168 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 ZBTB14O43829 449 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 RECQL4O94761 1208 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 VCLP18206 1134 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 GLDCP23378 1020 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 LMO2P25791 158 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 PTPN3P26045 913 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 GSTT1P30711 240 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 NPY2RP49146 381 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 TAF6P49848 677 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 RAB27AP51159 221 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 MPP3Q13368 585 aa13.32□□□□□ -0.28
CAST-223ENST00000508608 SMAD1Q15797 465 aaKnown RBP13.32□□□□□ -0.28
CAST-223ENST00000508608 KIZQ2M2Z5 673 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms