RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 CCDC162PA2VCL2 907 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 H0YIZ8 118 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 PSMD14O00487 310 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF213O14771 459 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 PRPF3O43395 683 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ARIH2O95376 493 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ATP6V1G2O95670 118 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 BAG3O95817 575 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 CYP2D6P10635 497 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 VDRP11473 427 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ALDH1B1P30837 517 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ALDH9A1P49189 494 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 CLCN2P51788 898 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 KRTAP10-9P60411 292 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 KRT83P78385 493 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 TBX2Q13207 712 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 NOGQ13253 232 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 CUL4BQ13620 913 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ITIH4Q14624 930 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 PTGISQ16647 500 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 IMMTQ16891 758 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 TWISTNBQ3B726 338 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC152Q4G0S7 254 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF618Q5T7W0 954 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 TEDDM1Q5T9Z0 273 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 C11orf87Q6NUJ2 197 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 BLOC1S2Q6QNY1 142 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 C6orf89Q6UWU4 347 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 TMEM108Q6UXF1 575 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 NOL8Q76FK4 1167 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MAVSQ7Z434 540 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 HEATR3Q7Z4Q2 680 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MAATS1Q7Z4T9 603 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 NEK8Q86SG6 692 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 NLRP14Q86W24 1093 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MREGQ8N565 214 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 FSIP1Q8NA03 581 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 CCDC63Q8NA47 563 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 NOC3LQ8WTT2 800 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MAIP1Q8WWC4 291 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 RSPH1Q8WYR4 309 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 RILPL2Q969X0 211 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF653Q96CK0 615 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 RAB3IPQ96QF0 476 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 WDR24Q96S15 920 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 SELENOOQ9BVL4 669 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 SEMA4CQ9C0C4 833 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MAF1Q9H063 256 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MRPL46Q9H2W6 279 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 MMADHCQ9H3L0 296 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 GOLPH3LQ9H4A5 285 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 HAUS4Q9H6D7 363 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 WDCPQ9H6R7 721 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 DDX25Q9UHL0 483 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 ITIH6Q6UXX5 1313 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 CNTNAP1P78357 1384 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 PXDNLA1KZ92 1463 aa4.86□□□□□ -1.63
PDLIM5-211ENST00000508531 GMNCA6NCL1 334 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 C5orf60A6NFR6 353 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 GLTPD2A6NH11 291 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 TISP43B9A030 160 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 QSOX1O00391 747 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 IFIT3O14879 490 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 KRT86O43790 486 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 N4BP1O75113 896 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 RNF8O76064 485 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 AHSGP02765 367 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 FTLP02792 175 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 EIF2S1P05198 315 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 MYL1P05976 194 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 PAEPP09466 180 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 RHOXF2BP0C7M4 288 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ALADP13716 330 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CPA3P15088 417 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 PRLRP16471 622 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 NR1D1P20393 614 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 KCNA3P22001 575 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CERS1P27544 350 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 MDH1P40925 334 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ME1P48163 572 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ACADVLP49748 655 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF134P52741 427 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 TUBA4AP68366 448 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 SP2Q02086 613 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 SPAG1Q07617 926 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 KLC1Q07866 573 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 KIF5AQ12840 1032 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 MYO1EQ12965 1108 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 IFT88Q13099 833 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 PRPF4BQ13523 1007 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF268Q14587 947 aaPredicted RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 POSTNQ15063 836 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ANKRD20A8PQ5CZ79 823 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 CEP78Q5JTW2 689 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 AARS2Q5JTZ9 985 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ZNF569Q5MCW4 686 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 PRAMEF17Q5VTA0 474 aa4.85□□□□□ -1.63
PDLIM5-211ENST00000508531 ANKRD16Q6P6B7 361 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms