RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SYCP2LQ5T4T6 812 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 HMBOX1Q6NT76 420 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 KDELC2Q7Z4H8 507 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 MORC1Q86VD1 984 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 LPAR1Q92633 364 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 RTKNQ9BST9 563 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 TMEM120AQ9BXJ8 343 aa5.85□□□□□ -1.47
TOPBP1-206ENST00000508524 FANCD2Q9BXW9 1451 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 SYT5O00445 386 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 MSI1O43347 362 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 PLIN1O60240 522 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 SETSIPP0DME0 302 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 ARRB2P32121 409 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 CDKN2AP42771 156 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 CDK7P50613 346 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 PGGT1BP53609 377 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 TNFAIP2Q03169 654 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 ERV3-1Q14264 604 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 SEMA3AQ14563 771 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 ARL13AQ5H913 290 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 LIN54Q6MZP7 749 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 ERAP2Q6P179 960 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 CCDC146Q8IYE0 955 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 ADAMTS15Q8TE58 950 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 NPAS1Q99742 590 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 FRMD8Q9BZ67 464 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 TASP1Q9H6P5 420 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 LIN7CQ9NUP9 197 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 DAPP1Q9UN19 280 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 DTX4Q9Y2E6 619 aa5.84□□□□□ -1.47
TOPBP1-206ENST00000508524 AGAP5A6NIR3 686 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 HEXIM1O94992 359 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 HTR3AP46098 478 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 RCAN1P53805 252 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 PNLIPRP1P54315 467 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 PMPCAQ10713 525 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 ZACNQ401N2 412 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 ENTPD8Q5MY95 495 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 PGBD2Q6P3X8 592 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 KIAA1324Q6UXG2 1013 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 HIPK2Q9H2X6 1198 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 LRCH1Q9Y2L9 728 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 PKP3Q9Y446 797 aa5.83□□□□□ -1.48
TOPBP1-206ENST00000508524 ABHD14A-ACY1A0A1B0GW23 586 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 TNFRSF13BO14836 293 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 SKAP2O75563 359 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 LCKP06239 509 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 ITGA2BP08514 1039 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 SERPINF1P36955 418 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 RHAGQ02094 409 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 ZBTB16Q05516 673 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 ATPAF1Q5TC12 328 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 NFRKBQ6P4R8 1299 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 KLBQ86Z14 1044 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 SLC44A2Q8IWA5 706 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 FAM110DQ8TAY7 271 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 SLC2A12Q8TD20 617 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 RBM38Q9H0Z9 239 aaKnown RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 ZNF304Q9HCX3 659 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 PRDM8Q9NQV8 689 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 SIRT3Q9NTG7 399 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 LRP12Q9Y561 859 aa5.82□□□□□ -1.48
TOPBP1-206ENST00000508524 ACTL6BO94805 426 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 STAT1P42224 750 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 PUM3Q15397 648 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 TBRG1Q3YBR2 411 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 KLHL22Q53GT1 634 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 UBAP2Q5T6F2 1119 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 TTC22Q5TAA0 569 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 KIAA1161Q6NSJ0 714 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 TMEM200AQ86VY9 491 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 ENDOVQ8N8Q3 282 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 ATG16L2Q8NAA4 619 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 SCAMP5Q8TAC9 235 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 ZNF419Q96HQ0 510 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 CRB3Q9BUF7 120 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 MAGEH1Q9H213 219 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 PABPC3Q9H361 631 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 HERC5Q9UII4 1024 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 PCDHA10Q9Y5I2 948 aa5.81□□□□□ -1.48
TOPBP1-206ENST00000508524 MROH2BQ7Z745 1585 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 EFCAB8A8MWE9 144 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 ACKR2O00590 384 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 KLKB1P03952 638 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 CYP21A2P08686 494 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 PRPH2P23942 346 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 GALNTL6Q49A17 601 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 ALG10Q5BKT4 473 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 ALG10BQ5I7T1 473 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 Q5PR19 223 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 SLC30A9Q6PML9 568 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 PARM1Q6UWI2 310 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 RAB11FIP2Q7L804 512 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 SLC25A41Q8N5S1 370 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 WASF1Q92558 559 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 SLC39A13Q96H72 371 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 ZNF479Q96JC4 524 aa5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 SEPSECSQ9HD40 501 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-206ENST00000508524 PNRC2Q9NPJ4 139 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms