RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 C2CD6Q53TS8 623 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-218ENST00000508503 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-218ENST00000508503 NAA35Q5VZE5 725 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 ZNF776Q68DI1 518 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-218ENST00000508503 TRIM72Q6ZMU5 477 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 PIP4P1Q86T03 277 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 MSANTD4Q8NCY6 345 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 ANKRD20A12PQ8NF67 263 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 NEK11Q8NG66 645 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 FRS2Q8WU20 508 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 RPRD1AQ96P16 312 aaPredicted RBP12.5□□□□□ -0.41
CLDND1-218ENST00000508503 HAPLN3Q96S86 360 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 PCDHB18PQ96TA0 734 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 TBCBQ99426 244 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 TKTL2Q9H0I9 626 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 OSGEPQ9NPF4 335 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 DNAAF2Q9NVR5 837 aaKnown RBP12.5□□□□□ -0.41
CLDND1-218ENST00000508503 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 ADAMTS1Q9UHI8 967 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 PAXBP1Q9Y5B6 917 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 ATXN2Q99700 1313 aaKnown RBP12.5□□□□□ -0.41
CLDND1-218ENST00000508503 DOCK4Q8N1I0 1966 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 FRYQ5TBA9 3013 aa12.5□□□□□ -0.41
CLDND1-218ENST00000508503 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 EDDM13A0A1B0GTR0 161 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 A0A1B0GTW7 788 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 TTC34A8MYJ7 566 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 ATP9BO43861 1147 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 CNTN5O94779 1100 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 DNTTP04053 509 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 CFIP05156 583 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 SYPP08247 313 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 ATP1A3P13637 1013 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 GNSP15586 552 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 PDGFRAP16234 1089 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 CDK11BP21127 795 aaKnown RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 SULT1E1P49888 294 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 GSCP56915 257 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 UBXN1Q04323 297 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 DEUP1Q05D60 604 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 ZNF177Q13360 481 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 DCAF12L1Q5VU92 463 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 SND1Q7KZF4 910 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 CIR1Q86X95 450 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 RGL4Q8IZJ4 473 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 CENPIQ92674 756 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 FAM131CQ96AQ9 280 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 RPL10LQ96L21 214 aaKnown RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 ZDHHC5Q9C0B5 715 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 PABPC3Q9H361 631 aaKnown RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
CLDND1-218ENST00000508503 SGK2Q9HBY8 427 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 ZNF212Q9UDV6 495 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 CABIN1Q9Y6J0 2220 aa12.49□□□□□ -0.41
CLDND1-218ENST00000508503 SPEGQ15772 3267 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 C2CD4BA6NLJ0 364 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 GOLGA8SH3BPF8 625 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 TEX33O43247 280 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 CD59P13987 128 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 PMLP29590 882 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SHC2P98077 582 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 CENPCQ03188 943 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SFSWAPQ12872 951 aaKnown RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SLC14A1Q13336 389 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 CST6Q15828 149 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 CLEC16AQ2KHT3 1053 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 CCDC14Q49A88 953 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 IRF2BP2Q7Z5L9 587 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SETD3Q86TU7 594 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 FAM124AQ86V42 546 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 PHF13Q86YI8 300 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 DHX40Q8IX18 779 aaKnown RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 PIAS4Q8N2W9 510 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SLC30A5Q8TAD4 765 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 CFAP57Q96MR6 1250 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SPAG5Q96R06 1193 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 ORAI3Q9BRQ5 295 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 SYT11Q9BT88 431 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 FUCA2Q9BTY2 467 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 NAT10Q9H0A0 1025 aaKnown RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 RTN4Q9NQC3 1192 aaKnown RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 FSCN3Q9NQT6 498 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 EIF2B4Q9UI10 523 aaKnown RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 MYO6Q9UM54 1294 aa12.48□□□□□ -0.41
CLDND1-218ENST00000508503 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.48□□□□□ -0.41
CLDND1-218ENST00000508503 ASPMQ8IZT6 3477 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 TCRBV5S1A1TA0A578 114 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 GIPC1O14908 333 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
CLDND1-218ENST00000508503 RNASEH1O60930 286 aaKnown RBP12.47□□□□□ -0.41
CLDND1-218ENST00000508503 SEMA4FO95754 770 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 SLC8A1P32418 973 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 RDXP35241 583 aaKnown RBP12.47□□□□□ -0.41
CLDND1-218ENST00000508503 ADRA1BP35368 520 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 GGCXP38435 758 aa12.47□□□□□ -0.41
CLDND1-218ENST00000508503 NNMTP40261 264 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms