RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 MAOBP27338 520 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 CD6P30203 668 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 CDH4P55283 916 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 KLHL30Q0D2K2 578 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 PTP4A2Q12974 167 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 CAMK2GQ13555 558 aaPredicted RBP9.66□□□□□ -0.86
DDX41-209ENST00000508279 PUM1Q14671 1186 aaKnown RBP eCLIP9.66□□□□□ -0.869e-7■□□□□ 10.2
DDX41-209ENST00000508279 NR1I3Q14994 352 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 ARL13BQ3SXY8 428 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 CCDC14Q49A88 953 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 ALFQ53S48 1182 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 TDRD12Q587J7 1177 aaKnown RBP9.66□□□□□ -0.86
DDX41-209ENST00000508279 TRIM61Q5EBN2 209 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 PLA2G2CQ5R387 149 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 RNF43Q68DV7 783 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 ACAD10Q6JQN1 1059 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 CXorf57Q6NSI4 855 aaKnown RBP9.66□□□□□ -0.86
DDX41-209ENST00000508279 RWDD4Q6NW29 188 aaKnown RBP9.66□□□□□ -0.86
DDX41-209ENST00000508279 SCYL2Q6P3W7 929 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 DCUN1D2Q6PH85 259 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 MON1BQ7L1V2 547 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 IRF2BP2Q7Z5L9 587 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 PHF13Q86YI8 300 aaPredicted RBP9.66□□□□□ -0.86
DDX41-209ENST00000508279 OR52K2Q8NGK3 314 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 NETO1Q8TDF5 533 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 FAM172AQ8WUF8 416 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 NT5C3BQ969T7 300 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 PGAP3Q96FM1 320 aaPredicted RBP9.66□□□□□ -0.86
DDX41-209ENST00000508279 MYO19Q96H55 970 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 MCEEQ96PE7 176 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 EDEM2Q9BV94 578 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 MIR1-1HGQ9H1L0 117 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 HAUS4Q9H6D7 363 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 FSCN3Q9NQT6 498 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 ITM2CQ9NQX7 267 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 TMEM74BQ9NUR3 256 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 IFNKQ9P0W0 207 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 SLCO3A1Q9UIG8 710 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 SLC25A13Q9UJS0 675 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 LAMA1P25391 3075 aa9.66□□□□□ -0.86
DDX41-209ENST00000508279 FAM47DPA6NHR8 397 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 C2CD4BA6NLJ0 364 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 SRPRAP08240 638 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 VAV1P15498 845 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 SDHBP21912 280 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 RRM1P23921 792 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 OR1E1P30953 314 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 RFC1P35251 1148 aaPredicted RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 MAPK8P45983 427 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 PSMD8P48556 350 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 OXCT1P55809 520 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 RPS14P62263 151 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 RPL7AP62424 266 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 IRX4P78413 519 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 SLC12A1Q13621 1099 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 UAP1L1Q3KQV9 507 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 TTC31Q49AM3 519 aaPredicted RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 SYCP2LQ5T4T6 812 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 E4F1Q66K89 784 aaPredicted RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 ZNF776Q68DI1 518 aaPredicted RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 IL31Q6EBC2 164 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 ZNF571Q7Z3V5 609 aaPredicted RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 SYT12Q8IV01 421 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 MMAAQ8IVH4 418 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 SLC41A1Q8IVJ1 513 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 DRC7Q8IY82 874 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 MCOLN2Q8IZK6 566 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 STK40Q8N2I9 435 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 RNF214Q8ND24 703 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 C3orf20Q8ND61 904 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 MRGPRX3Q96LB0 322 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 HAPLN3Q96S86 360 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 PPP1R9BQ96SB3 815 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 SPON2Q9BUD6 331 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.65□□□□□ -0.86
DDX41-209ENST00000508279 NUP58Q9BVL2 599 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 GTPBP2Q9BX10 602 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 NUSAP1Q9BXS6 441 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 MAGEB5Q9BZ81 275 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 TSPY26PQ9H489 355 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 WSB2Q9NYS7 404 aaPredicted RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 USP36Q9P275 1121 aaKnown RBP9.65□□□□□ -0.86
DDX41-209ENST00000508279 MYO6Q9UM54 1294 aa9.65□□□□□ -0.86
DDX41-209ENST00000508279 EDDM13A0A1B0GTR0 161 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 A0A1W2PP55 124 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 SIGLEC16A6NMB1 481 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 C4orf47A7E2U8 309 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 MID1O15344 667 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 CCP110O43303 1012 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 FOXD2O60548 495 aaPredicted RBP9.64□□□□□ -0.87
DDX41-209ENST00000508279 SNAP91O60641 907 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 IL1BP01584 269 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 DESP17661 470 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 OXTRP30559 389 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 ACSL1P33121 698 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 PTPN9P43378 593 aa9.64□□□□□ -0.87
DDX41-209ENST00000508279 ATXN3P54252 364 aaPredicted RBP9.64□□□□□ -0.87
DDX41-209ENST00000508279 KRT83P78385 493 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms