RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ZNF423Q2M1K9 1284 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 CCDC153Q494R4 210 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 FSTL4Q6MZW2 842 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 STRA8Q7Z7C7 330 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 ZFP28Q8NHY6 868 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 RCN3Q96D15 328 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 MARK4Q96L34 752 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 RBBP8Q99708 897 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 GATA5Q9BWX5 397 aaPredicted RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 RBM38Q9H0Z9 239 aaKnown RBP13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 HOXC10Q9NYD6 342 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 NDUFA13Q9P0J0 144 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 TMCO1Q9UM00 188 aa13.73□□□□□ -0.21
SNCAIP-209ENST00000508017 A0A096LPK6 155 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 LCP1P13796 627 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 DPEP1P16444 411 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 GARSP41250 739 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 MAGEA12P43365 314 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PHKA2P46019 1235 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 NAB1Q13506 487 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 AMHR2Q16671 573 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 RARS2Q5T160 578 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 TMEM198Q66K66 360 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 B3GNT6Q6ZMB0 384 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 BNC2Q6ZN30 1099 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 FAM131BQ86XD5 332 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 TICAM1Q8IUC6 712 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 GALNT4Q8N4A0 578 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 CHST13Q8NET6 341 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 OR52K1Q8NGK4 314 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 COPS5Q92905 334 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 ZNF669Q96BR6 464 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PRPF18Q99633 342 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 CPNE1Q99829 537 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PKP2Q99959 881 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PDGFDQ9GZP0 370 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 ZNF112Q9UJU3 913 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 A0A0G2JMZ2 1700 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 LRRC37A2A6NM11 1700 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 hCG_2014768A0A024R1R8 64 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 A0A087WZ62 844 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 C19orf81C9J6K1 198 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 POLBP06746 335 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 ENO3P13929 434 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PTPN9P43378 593 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 SERPINB8P50452 374 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 RBP5P82980 135 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 LSM12Q3MHD2 195 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PIGGQ5H8A4 983 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 GRTP1Q5TC63 336 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 ZNF567Q8N184 647 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 KYQ8NBH2 561 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 CENPIQ92674 756 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 FERMT1Q9BQL6 677 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 FDXACB1Q9BRP7 624 aaPredicted RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 DPEP3Q9H4B8 488 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 ASB7Q9H672 318 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 LMCD1Q9NZU5 365 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 RAB26Q9ULW5 256 aa13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 PRPF19Q9UMS4 504 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 GNEQ9Y223 722 aaKnown RBP13.72□□□□□ -0.21
SNCAIP-209ENST00000508017 MCM3APO60318 1980 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 JUNP05412 331 aaKnown RBP13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 THRAP10827 490 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 MCF2P10911 925 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 DESP17661 470 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 ZNF280AP59817 542 aaPredicted RBP13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 LCA5Q86VQ0 697 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 CCNYQ8ND76 341 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 KBTBD7Q8WVZ9 684 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 NDRG1Q92597 394 aaKnown RBP13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 KLHL32Q96NJ5 620 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 CATSPER2Q96P56 530 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 NUF2Q9BZD4 464 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 VPS33BQ9H267 617 aa13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 EIF2B3Q9NR50 452 aaKnown RBP13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 PRMT7Q9NVM4 692 aaPredicted RBP13.71□□□□□ -0.21
SNCAIP-209ENST00000508017 RGSL1A5PLK6 1076 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 TMEM114B3SHH9 223 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 TRIM13O60858 407 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 PCSK6P29122 969 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 LIMK2P53671 638 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 TREML2Q5T2D2 321 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 METTL21CQ5VZV1 264 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 OLFML2BQ68BL8 750 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 C16orf89Q6UX73 402 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 CLEC14AQ86T13 490 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 FAM156AQ8NDB6 213 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 ISL2Q96A47 359 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 KIF12Q96FN5 646 aa13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 MRPS26Q9BYN8 205 aaKnown RBP13.71□□□□□ -0.22
SNCAIP-209ENST00000508017 SENP6Q9GZR1 1112 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms