RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CIR1Q86X95 450 aaPredicted RBP20.61■□□□□ 0.89
USP53-203ENST00000507597 CPNE8Q86YQ8 564 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 LRRC49Q8IUZ0 686 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 RAPGEF5Q92565 580 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 TSC1Q92574 1164 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 ACDQ96AP0 544 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 RNF25Q96BH1 459 aaPredicted RBP20.61■□□□□ 0.89
USP53-203ENST00000507597 MYEOVQ96EZ4 313 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 RNF157Q96PX1 679 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 C2orf49Q9BVC5 232 aaPredicted RBP20.61■□□□□ 0.89
USP53-203ENST00000507597 MAGEB5Q9BZ81 275 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 DNAI1Q9UI46 699 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 PLA2G4CQ9UP65 541 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 SLC8A2Q9UPR5 921 aa20.61■□□□□ 0.89
USP53-203ENST00000507597 KRBA1A5PL33 1030 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 ARHGAP42A6NI28 874 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 HLA-FP30511 346 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 MAGEA9P43362 315 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 GEMIN4P57678 1058 aaKnown RBP20.6■□□□□ 0.89
USP53-203ENST00000507597 GNA12Q03113 381 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 KDSRQ06136 332 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 LMAN2Q12907 356 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 DPYSQ14117 519 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 UBXN2BQ14CS0 331 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 SDE2Q6IQ49 451 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 C12orf40Q86WS4 652 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 ZNF354CQ86Y25 554 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 RFX6Q8HWS3 928 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 UMODL1-AS1Q8N2C9 162 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 FAF2Q96CS3 445 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 CHFRQ96EP1 664 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 LTB4R2Q9NPC1 389 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 VPS28Q9UK41 221 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 NDRG2Q9UN36 371 aaKnown RBP20.6■□□□□ 0.89
USP53-203ENST00000507597 RAD54BQ9Y620 910 aa20.6■□□□□ 0.89
USP53-203ENST00000507597 TICRRQ7Z2Z1 1910 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 CXorf51AA0A1B0GTR3 108 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 ZSCAN5CA6NGD5 496 aaPredicted RBP20.59■□□□□ 0.89
USP53-203ENST00000507597 APOL1O14791 398 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 TJP3O95049 919 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 TUBB4AP04350 444 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 AMPD1P23109 780 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 PEX5P50542 639 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 ST8SIA6P61647 398 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 GNG11P61952 73 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 SLC20A2Q08357 652 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 PLEKHG6Q3KR16 790 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 HSF5Q4G112 596 aaPredicted RBP20.59■□□□□ 0.89
USP53-203ENST00000507597 CCDC181Q5TID7 509 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 IL31Q6EBC2 164 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 CXorf57Q6NSI4 855 aaKnown RBP20.59■□□□□ 0.89
USP53-203ENST00000507597 TXNDC11Q6PKC3 985 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 SPOCD1Q6ZMY3 1216 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 KIAA0907Q7Z7F0 614 aaPredicted RBP20.59■□□□□ 0.89
USP53-203ENST00000507597 METTL3Q86U44 580 aaKnown RBP20.59■□□□□ 0.89
USP53-203ENST00000507597 KRT35Q92764 455 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 CIPCQ9C0C6 399 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 CARD9Q9H257 536 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 TBC1D17Q9HA65 648 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 KLHL11Q9NVR0 708 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 ELOVL2Q9NXB9 296 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 SLC25A13Q9UJS0 675 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 STARD13Q9Y3M8 1113 aa20.59■□□□□ 0.89
USP53-203ENST00000507597 CUL9Q8IWT3 2517 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 FAM170BA6NMN3 283 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 DCLK1O15075 740 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 ATG13O75143 517 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 CD48P09326 243 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 MX2P20592 715 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 IL4RP24394 825 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 PTPN7P35236 360 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 CSKP41240 450 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 MRPS21P82921 87 aaKnown RBP20.58■□□□□ 0.89
USP53-203ENST00000507597 PITRM1Q5JRX3 1037 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 MBLAC2Q68D91 279 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 RETSATQ6NUM9 610 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 MFSD7Q6UXD7 560 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 FEM1AQ9BSK4 669 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 IER2Q9BTL4 223 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 SPON2Q9BUD6 331 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 ATP13A1Q9HD20 1204 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 HAUS2Q9NVX0 235 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 PACSIN2Q9UNF0 486 aaPredicted RBP20.58■□□□□ 0.89
USP53-203ENST00000507597 NEU3Q9UQ49 428 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 SIT1Q9Y3P8 196 aa20.58■□□□□ 0.89
USP53-203ENST00000507597 A0A0C4DFX4 3053 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 TMEM221A6NGB7 291 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 M0R296 226 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 DDX3YO15523 660 aaKnown RBP20.57■□□□□ 0.88
USP53-203ENST00000507597 SRPRAP08240 638 aaKnown RBP20.57■□□□□ 0.88
USP53-203ENST00000507597 CD70P32970 193 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 CDKN2BP42772 138 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 NR2C2P49116 596 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 IRAK1P51617 712 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 MMRN1Q13201 1228 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 PAFAH1B3Q15102 231 aaKnown RBP20.57■□□□□ 0.88
USP53-203ENST00000507597 FSCBQ5H9T9 825 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 SLC35F6Q8N357 371 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 PHTF2Q8N3S3 785 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 DCAF4L2Q8NA75 395 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms