RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 FNDC1Q4ZHG4 1894 aaPredicted RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 EMSYQ7Z589 1322 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 PPFIA2O75334 1257 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 PROP1O75360 226 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 SGPL1O95470 568 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 LATS1O95835 1130 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 TBX18O95935 607 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 PKMP14618 531 aaKnown RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 TYK2P29597 1187 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 MTNR1AP48039 350 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 INHBEP58166 350 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 TGFB2P61812 414 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 TUBA4AP68366 448 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 RHAGQ02094 409 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 DDX10Q13206 875 aaKnown RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 TDGQ13569 410 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 PRICKLE4Q2TBC4 344 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 RUNDC3AQ59EK9 446 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 ARL13AQ5H913 290 aaPredicted RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 SUMO4Q6EEV6 95 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 FBXO42Q6P3S6 717 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 SLC30A9Q6PML9 568 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 ZNF66Q6ZN08 573 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 BRSK2Q8IWQ3 736 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 PAQR4Q8N4S7 273 aaPredicted RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 TBC1D22AQ8WUA7 517 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 ZFPM2Q8WW38 1151 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 IP6K1Q92551 441 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 DPF1Q92782 380 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 MAP4K1Q92918 833 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 ZUFSPQ96AP4 578 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 ZNF764Q96H86 408 aaPredicted RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 ADAD1Q96M93 576 aaKnown RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 LBHD1Q9BQE6 289 aaPredicted RBP3.8□□□□□ -1.8
LSM6-205ENST00000507449 FUZQ9BT04 418 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 TRIM31Q9BZY9 425 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 TRIM2Q9C040 744 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 LMAN2LQ9H0V9 348 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 TAOK3Q9H2K8 898 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 MROH8Q9H579 483 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 Q9N2J8 555 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 UPB1Q9UBR1 384 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 DTX4Q9Y2E6 619 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 CYP46A1Q9Y6A2 500 aa3.8□□□□□ -1.8
LSM6-205ENST00000507449 SLC22A23A1A5C7 686 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 MANSC4A6NHS7 340 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 SH2D7A6NKC9 451 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 LINC01548A6NM66 108 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 B4E171 279 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 SYN3O14994 580 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 MBD4O95243 580 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 PLAUP00749 431 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 WNT1P04628 370 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 WEE2P0C1S8 567 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 CYP4B1P13584 511 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 TNNT1P13805 278 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 AKR1A1P14550 325 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 HOXB9P17482 250 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 CD72P21854 359 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 RPS6KB1P23443 525 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ABCD3P28288 659 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ELF1P32519 619 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 DDIT3P35638 169 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 HNF1BP35680 557 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 PSMC2P35998 433 aaKnown RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 GGT5P36269 586 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 PGM1P36871 562 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 TSPAN7P41732 249 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 RPS6KA3P51812 740 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 GEMIN4P57678 1058 aaKnown RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 ARHGAP8P85298 464 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 MTA1Q13330 715 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 BYSLQ13895 437 aaKnown RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 PGM5Q15124 567 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 GPR162Q16538 588 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 BAK1Q16611 211 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 AP5B1Q2VPB7 878 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 CERKLQ49MI3 558 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 GLE1Q53GS7 698 aaKnown RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 KIAA1755Q5JYT7 1200 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ACAD10Q6JQN1 1059 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 FAM180BQ6P0A1 224 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ZNF813Q6ZN06 617 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ZNF788Q6ZQV5 615 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 C1orf122Q6ZSJ8 110 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 H1FNTQ75WM6 255 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 LRRC8DQ7L1W4 858 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 MAATS1Q7Z4T9 603 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 GALNT7Q86SF2 657 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 TSPYL6Q8N831 410 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 ARL14EPQ8N8R7 260 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 PPHLN1Q8NEY8 458 aaKnown RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 SEMA6DQ8NFY4 1073 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 WIPF2Q8TF74 440 aaPredicted RBP3.79□□□□□ -1.8
LSM6-205ENST00000507449 PIGKQ92643 395 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 KAT2AQ92830 837 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 SKA1Q96BD8 255 aa3.79□□□□□ -1.8
LSM6-205ENST00000507449 RNF125Q96EQ8 232 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms