RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 TSSK4Q6SA08 328 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 TAS1R1Q7RTX1 841 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 GSPT2Q8IYD1 628 aaKnown RBP8.21□□□□□ -1.1
PFDN1-202ENST00000507185 MIER2Q8N344 545 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 HPS3Q969F9 1004 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 MIEF2Q96C03 454 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 TNIP3Q96KP6 325 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 INO80BQ9C086 356 aaPredicted RBP8.21□□□□□ -1.1
PFDN1-202ENST00000507185 NLRC4Q9NPP4 1024 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 BARHL2Q9NY43 387 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 EPS15L1Q9UBC2 864 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 STK39Q9UEW8 545 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 RALYQ9UKM9 306 aaKnown RBP8.21□□□□□ -1.1
PFDN1-202ENST00000507185 RAB23Q9ULC3 237 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 SSX2IPQ9Y2D8 614 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 KIAA1671Q9BY89 1806 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 DOCK5Q9H7D0 1870 aa8.21□□□□□ -1.1
PFDN1-202ENST00000507185 FAM186AA6NE01 2351 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 IGLV3-22A0A075B6J6 115 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 HMGB1P1B2RPK0 211 aaPredicted RBP8.2□□□□□ -1.1
PFDN1-202ENST00000507185 TOX4O94842 621 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LAMP2P13473 410 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 OSMP13725 252 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 RPL17P18621 184 aaKnown RBP8.2□□□□□ -1.1
PFDN1-202ENST00000507185 AGXTP21549 392 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LIFRP42702 1097 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 ADAM8P78325 824 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 AKAP17AQ02040 695 aaKnown RBP8.2□□□□□ -1.1
PFDN1-202ENST00000507185 POU5F1BQ06416 359 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LONRF1Q17RB8 773 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 TOR2AQ5JU69 321 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LIN9Q5TKA1 542 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LRCH2Q5VUJ6 765 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 PARM1Q6UWI2 310 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 MIER3Q7Z3K6 550 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 ZZZ3Q8IYH5 903 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 GRAMD1CQ8IYS0 662 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LINC01465Q8N7H1 131 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 SUMF1Q8NBK3 374 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 CMASQ8NFW8 434 aaPredicted RBP8.2□□□□□ -1.1
PFDN1-202ENST00000507185 SLC2A13Q96QE2 648 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 NAP1L4Q99733 375 aaKnown RBP8.2□□□□□ -1.1
PFDN1-202ENST00000507185 KXD1Q9BQD3 176 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 HERC2P3Q9BVR0 1158 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 TEKT3Q9BXF9 490 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 UNC45AQ9H3U1 944 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 MTG2Q9H4K7 406 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 C6orf50Q9HD87 102 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 CEP72Q9P209 647 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 DMTF1Q9Y222 760 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 GPR45Q9Y5Y3 372 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 GVINP1Q7Z2Y8 2422 aa8.2□□□□□ -1.1
PFDN1-202ENST00000507185 LAMA4Q16363 1823 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 KLF18A0A0U1RQI7 1052 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 PRR5-ARHGAP8B1AHC4 643 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 F8W810 466 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 hCG_1984214I3L0E3 225 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 CCL16O15467 120 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ERLIN2O94905 339 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 PRPF6O94906 941 aaKnown RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 POU2F2P09086 479 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 VSIG10L2P0DP72 767 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 CD40P25942 277 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 MLH1P40692 756 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 MTNR1BP49286 362 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 JAK3P52333 1124 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ADKP55263 362 aaKnown RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 NTHL1P78549 312 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ARHGAP8P85298 464 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 CDC42EP1Q00587 391 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 STK3Q13188 491 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 HTR4Q13639 388 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ELAVL1Q15717 326 aaKnown RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 MLF2Q15773 248 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 PLA2G4FQ68DD2 849 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 APOA5Q6Q788 366 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 TPRG1Q6ZUI0 275 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 OVCH2Q7RTZ1 564 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 KANSL1Q7Z3B3 1105 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 SRGAP1Q7Z6B7 1085 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 GRASPQ7Z6J2 395 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ZNF410Q86VK4 478 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 CEP57Q86XR8 500 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 FAM186BQ8IYM0 893 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ZNF713Q8N859 430 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ANKRD42Q8N9B4 389 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 FAM156AQ8NDB6 213 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 EXOC6Q8TAG9 804 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 PPP1R35Q8TAP8 253 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 CCDC12Q8WUD4 166 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 RSPH1Q8WYR4 309 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 MAP4K1Q92918 833 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ZNF707Q96C28 371 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 ACAP3Q96P50 834 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 TMEM175Q9BSA9 504 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 RPP25Q9BUL9 199 aaKnown RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 TRIM6Q9C030 488 aaPredicted RBP8.19□□□□□ -1.1
PFDN1-202ENST00000507185 HAPLN2Q9GZV7 340 aa8.19□□□□□ -1.1
PFDN1-202ENST00000507185 NT5C3AQ9H0P0 336 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms