RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 TNNC1P63316 161 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 ORC2Q13416 577 aaPredicted RBP7.5□□□□□ -1.21
VCAN-207ENST00000507162 HNRNPA1L2Q32P51 320 aaKnown RBP7.5□□□□□ -1.21
VCAN-207ENST00000507162 WDR72Q3MJ13 1102 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 SETMARQ53H47 684 aaPredicted RBP7.5□□□□□ -1.21
VCAN-207ENST00000507162 C9orf64Q5T6V5 341 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 KLHDC10Q6PID8 442 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 STK40Q8N2I9 435 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 ZMIZ2Q8NF64 920 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 OR13H1Q8NG92 308 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 OR5B17Q8NGF7 314 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 WDR48Q8TAF3 677 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PRR7Q8TB68 274 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 LMX1AQ8TE12 382 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 SMARCD1Q96GM5 515 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 HEXIM2Q96MH2 286 aaKnown RBP7.5□□□□□ -1.21
VCAN-207ENST00000507162 FAM129BQ96TA1 746 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 SMOQ99835 787 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PCIF1Q9H4Z3 704 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PRDM8Q9NQV8 689 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 KRT82Q9NSB4 513 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 INTS13Q9NVM9 706 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 PLA2G2EQ9NZK7 142 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 FOXJ2Q9P0K8 574 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 ODF2LQ9ULJ1 636 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 SCML2Q9UQR0 700 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 DAAM1Q9Y4D1 1078 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 LOXL2Q9Y4K0 774 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 TACC2O95359 2948 aa7.5□□□□□ -1.21
VCAN-207ENST00000507162 A0A1W2PQ27 194 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 A0A1W2PQ64 194 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 A0A1W2PQC6 194 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 ARHGAP10A1A4S6 786 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 C10orf142B7Z368 130 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 NKX2-8O15522 239 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 PFKFB2O60825 505 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 TBCAO75347 108 aaKnown RBP7.49□□□□□ -1.21
VCAN-207ENST00000507162 CNTN5O94779 1100 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 CLSTN1O94985 981 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 ADH1BP00325 375 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 LDHAP00338 332 aaKnown RBP7.49□□□□□ -1.21
VCAN-207ENST00000507162 CST3P01034 146 aaPredicted RBP7.49□□□□□ -1.21
VCAN-207ENST00000507162 PRKAR1AP10644 381 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 SLC6A4P31645 630 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 CD70P32970 193 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 ETV5P41161 510 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 ATP1A2P50993 1020 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 METAP1P53582 386 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 CLDN2P57739 230 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 CCL7P80098 99 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 PDE4CQ08493 712 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 IL17AQ16552 155 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 DUOXA2Q1HG44 320 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 DEFB109BQ30KR1 87 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 DTHD1Q6ZMT9 781 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 Q6ZSR6 202 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 DYMQ7RTS9 669 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 GPRIN1Q7Z2K8 1008 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 DTX1Q86Y01 620 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 CPXM2Q8N436 756 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 IL22RA1Q8N6P7 574 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 NECAB1Q8N987 351 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 ZNF548Q8NEK5 533 aaPredicted RBP7.49□□□□□ -1.21
VCAN-207ENST00000507162 CPT1CQ8TCG5 803 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 KCNN1Q92952 543 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 GLMNQ92990 594 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 CATSPER2Q96P56 530 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 NOX5Q96PH1 765 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 GFM1Q96RP9 751 aaKnown RBP7.49□□□□□ -1.21
VCAN-207ENST00000507162 CGRRF1Q99675 332 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 FZD3Q9NPG1 666 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 GULP1Q9UBP9 304 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 IPO11Q9UI26 975 aaKnown RBP7.49□□□□□ -1.21
VCAN-207ENST00000507162 SALL4Q9UJQ4 1053 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 TP53TG5Q9Y2B4 290 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 UBE4BO95155 1302 aa7.49□□□□□ -1.21
VCAN-207ENST00000507162 AKAP9Q99996 3911 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 TARSL2A2RTX5 802 aaKnown RBP7.48□□□□□ -1.21
VCAN-207ENST00000507162 VWA3AA6NCI4 1184 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 NTN3O00634 580 aaPredicted RBP7.48□□□□□ -1.21
VCAN-207ENST00000507162 AQP9O43315 295 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 TBL1XO60907 577 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 RNGTTO60942 597 aaKnown RBP7.48□□□□□ -1.21
VCAN-207ENST00000507162 KIF20AO95235 890 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 FAM163BP0C2L3 166 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 CCDC130P13994 396 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 LIFP15018 202 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 AKT2P31751 481 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 ABCD1P33897 745 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 CSKP41240 450 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 KCNA1Q09470 495 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 C1orf61Q13536 156 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 SEPT6Q14141 434 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 FGL2Q14314 439 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 NUGGCQ68CJ6 796 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 OR6B2Q6IFH4 312 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 KIAA0907Q7Z7F0 614 aaPredicted RBP7.48□□□□□ -1.21
VCAN-207ENST00000507162 SCD5Q86SK9 330 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 ACOT1Q86TX2 421 aa7.48□□□□□ -1.21
VCAN-207ENST00000507162 TRIM69Q86WT6 500 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms