RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 FZD10Q9ULW2 581 aa20.44■□□□□ 0.86
SNX25-204ENST00000506896 DCHS1Q96JQ0 3298 aa20.44■□□□□ 0.86
SNX25-204ENST00000506896 GOLGA6L6A8MZA4 724 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 MYO1FO00160 1098 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 PRPSAP2O60256 369 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 HOXB2P14652 356 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 PCK1P35558 622 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 CSKP41240 450 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 IRAK1P51617 712 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 SULT2A1Q06520 285 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 STARD3Q14849 445 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 LPAL2Q16609 132 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 PLEKHG6Q3KR16 790 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 PITRM1Q5JRX3 1037 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 C6orf118Q5T5N4 469 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 PRR23BQ6ZRT6 265 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 RASSF3Q86WH2 238 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 PSTKQ8IV42 348 aaKnown RBP20.43■□□□□ 0.86
SNX25-204ENST00000506896 ABCA7Q8IZY2 2146 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 NIPA2Q8N8Q9 360 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 ZNF564Q8TBZ8 553 aaPredicted RBP20.43■□□□□ 0.86
SNX25-204ENST00000506896 ACOX2Q99424 681 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 CACNA2D2Q9NY47 1150 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 CTTNBP2NLQ9P2B4 639 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 STON1Q9Y6Q2 735 aa20.43■□□□□ 0.86
SNX25-204ENST00000506896 ZBTB24O43167 697 aaPredicted RBP20.42■□□□□ 0.86
SNX25-204ENST00000506896 CNTN5O94779 1100 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 LRIG2O94898 1065 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 FECHP22830 423 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 MIPP30301 263 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 HTR7P34969 479 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 CYLC1P35663 651 aaPredicted RBP20.42■□□□□ 0.86
SNX25-204ENST00000506896 ZNF234Q14588 700 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 ALFQ53S48 1182 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 SERPINA13PQ6UXR4 307 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 TMTC1Q8IUR5 882 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 KDM1BQ8NB78 822 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 SORCS1Q8WY21 1168 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 TBC1D31Q96DN5 1066 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 EPAS1Q99814 870 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 HINFPQ9BQA5 517 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 PACSIN1Q9BY11 444 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 LUC7LQ9NQ29 371 aaKnown RBP20.42■□□□□ 0.86
SNX25-204ENST00000506896 MPP6Q9NZW5 540 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 INTS6Q9UL03 887 aaKnown RBP20.42■□□□□ 0.86
SNX25-204ENST00000506896 CEP250Q9BV73 2442 aa20.42■□□□□ 0.86
SNX25-204ENST00000506896 LRCH4O75427 683 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 RPP40O75818 363 aaKnown RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 LCA5LO95447 670 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 RETP07949 1114 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 SRPRAP08240 638 aaKnown RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 OR1E1P30953 314 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 IL12RB1P42701 662 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 ST8SIA6P61647 398 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 PTPRNQ16849 979 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 FNDC3BQ53EP0 1204 aaKnown RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 ARTNQ5T4W7 220 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 ERMARDQ5T6L9 678 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 RWDD4Q6NW29 188 aaKnown RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 ZNF783Q6ZMS7 281 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 CEP68Q76N32 757 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 TFAP2DQ7Z6R9 452 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 RHOT2Q8IXI1 618 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 KIAA2013Q8IYS2 634 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 FAM160A2Q8N612 972 aaPredicted RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 ARFGAP1Q8N6T3 406 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 GPR161Q8N6U8 529 aaKnown RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 CYB5D2Q8WUJ1 264 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 ZC3H10Q96K80 434 aaKnown RBP20.41■□□□□ 0.86
SNX25-204ENST00000506896 FEM1AQ9BSK4 669 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 GMEB2Q9UKD1 530 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 USP18Q9UMW8 372 aa20.41■□□□□ 0.86
SNX25-204ENST00000506896 A0A1W2PQF6 199 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 ILVBLA1L0T0 632 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 FAM72CH0Y354 149 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 SYNCRIPO60506 623 aaKnown RBP20.4■□□□□ 0.86
SNX25-204ENST00000506896 RHOCP08134 193 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 RHOQP17081 205 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 WASP42768 502 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 MAPKAPK2P49137 400 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 ZNF135P52742 658 aaPredicted RBP20.4■□□□□ 0.86
SNX25-204ENST00000506896 ECT2LQ008S8 904 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 SPA17Q15506 151 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 FAM72AQ5TYM5 149 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 RNF219Q5W0B1 726 aaPredicted RBP20.4■□□□□ 0.86
SNX25-204ENST00000506896 FAM72DQ6L9T8 149 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 FAM72BQ86X60 149 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 APCDD1Q8J025 514 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 DOCK4Q8N1I0 1966 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 MUC3BQ9H195 1237 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 TMEM245Q9H330 911 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 PARD6AQ9NPB6 346 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 DONSONQ9NYP3 566 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 ZNF212Q9UDV6 495 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 PCSK1NQ9UHG2 260 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 VPS28Q9UK41 221 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 AP4E1Q9UPM8 1137 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 DNAH14Q0VDD8 3507 aa20.4■□□□□ 0.86
SNX25-204ENST00000506896 TCRBV21S2A2A0A5A6 115 aa20.39■□□□□ 0.85
SNX25-204ENST00000506896 WASH3PC4AMC7 463 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms