RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 F9P00740 461 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 TPM2P07951 284 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 LAMA1P25391 3075 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 MAOBP27338 520 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 MZF1P28698 734 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 ACSL1P33121 698 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 GGCXP38435 758 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 STK19P49842 368 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SULT1E1P49888 294 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 OXCT1P55809 520 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 RNASE9P60153 205 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 ST8SIA6P61647 398 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 ECT2LQ008S8 904 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 CDR2Q01850 454 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SEMA3BQ13214 749 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SYCP1Q15431 976 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SLC25A52Q3SY17 297 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 C2CD6Q53TS8 623 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 DCAF12L1Q5VU92 463 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 NAA35Q5VZE5 725 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 PSAPL1Q6NUJ1 521 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 USP30Q70CQ3 517 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 RGL4Q8IZJ4 473 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 KNL1Q8NG31 2342 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 FRS2Q8WU20 508 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 CPA5Q8WXQ8 436 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 PTPRN2Q92932 1015 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 RNF34Q969K3 372 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 RPRD1AQ96P16 312 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 FAM129BQ96TA1 746 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 TBCBQ99426 244 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 PABPC3Q9H361 631 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 C6orf106Q9H6K1 298 aaPredicted RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 NLRC4Q9NPP4 1024 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 DNAAF2Q9NVR5 837 aaKnown RBP9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SLCO3A1Q9UIG8 710 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 VANGL2Q9ULK5 521 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 SCML1Q9UN30 329 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 TBC1D30Q9Y2I9 924 aa9.35□□□□□ -0.91
PDLIM5-209ENST00000506632 IGLV3-10A0A075B6K4 115 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 DRGXA6NNA5 263 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 MEI4A8MW99 385 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 GIPC1O14908 333 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 CLDN11O75508 207 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ENDOD1O94919 500 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SEMA4FO95754 770 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 DNTTP04053 509 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SYPP08247 313 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 UNGP13051 313 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 CEACAM1P13688 526 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 GNSP15586 552 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 MMP8P22894 467 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 MAPK8P45983 427 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 NOVA1P51513 510 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 CDH4P55283 916 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 GSCP56915 257 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SHC2P98077 582 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 BNC1Q01954 994 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 DEUP1Q05D60 604 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 TYRO3Q06418 890 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SULT2A1Q06520 285 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 PTP4A2Q12974 167 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 CST6Q15828 149 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 UAP1L1Q3KQV9 507 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 TTC31Q49AM3 519 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ALFQ53S48 1182 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 TRIM72Q6ZMU5 477 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 FAM124AQ86V42 546 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 DHX40Q8IX18 779 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ZCCHC9Q8N567 271 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 MINDY1Q8N5J2 469 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 RPL10LQ96L21 214 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 C1orf74Q96LT6 269 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SPAG5Q96R06 1193 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ORAI3Q9BRQ5 295 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 FEM1AQ9BSK4 669 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 BTBD1Q9H0C5 482 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 TKTL2Q9H0I9 626 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 WDCPQ9H6R7 721 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SGK2Q9HBY8 427 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 OSGEPQ9NPF4 335 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ZNF212Q9UDV6 495 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SERGEFQ9UGK8 458 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ADAMTS1Q9UHI8 967 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 EIF2B4Q9UI10 523 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 SLCO1B1Q9Y6L6 691 aa9.34□□□□□ -0.91
PDLIM5-209ENST00000506632 DOCK4Q8N1I0 1966 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 MAP1BP46821 2468 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM170AA1A519 330 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 GOLGA8SH3BPF8 625 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 MID1O15344 667 aa9.33□□□□□ -0.92
PDLIM5-209ENST00000506632 BCAT2O15382 392 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms