RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 FNDC3BQ53EP0 1204 aaKnown RBP18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 ASCL5Q7RTU5 278 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 SUMF1Q8NBK3 374 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 BTBD6Q96KE9 485 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 ZYG11BQ9C0D3 744 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 SLC6A17Q9H1V8 727 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 GPATCH2LQ9NWQ4 482 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 PLA2G4CQ9UP65 541 aa18.76■□□□□ 0.59
PDLIM7-216ENST00000506537 PRR23AA6NEV1 266 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 LRCH4O75427 683 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 ALDH1A2O94788 518 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 MOCS3O95396 460 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 ASLP04424 464 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 NDUFV2P19404 249 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 MIPP30301 263 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 AIF1P55008 147 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 EFHC2Q5JST6 749 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 RNF219Q5W0B1 726 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 NLRP14Q86W24 1093 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 GAB3Q8WWW8 586 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 NKD2Q969F2 451 aaPredicted RBP18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 CCDC42Q96M95 316 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 FEM1AQ9BSK4 669 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 PCSK1NQ9UHG2 260 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 ANAPC7Q9UJX3 599 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 ERVW-1Q9UQF0 538 aa18.75■□□□□ 0.59
PDLIM7-216ENST00000506537 A0A0D9SEW6 157 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 EPHX1P07099 455 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 RHOCP08134 193 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 TCF4P15884 667 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 DESP17661 470 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 L1CAMP32004 1257 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 CNR2P34972 360 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 STK19P49842 368 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 OXCT1P55809 520 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 ECT2LQ008S8 904 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 STARD3Q14849 445 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 E2F5Q15329 346 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 CA9Q16790 459 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 RWDD4Q6NW29 188 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 SETD3Q86TU7 594 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 ZNF564Q8TBZ8 553 aaPredicted RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 TBC1D31Q96DN5 1066 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 RPL10LQ96L21 214 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 PSMB7Q99436 277 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 SNRNP25Q9BV90 132 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 MKRN2Q9H000 416 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 SEMA4AQ9H3S1 761 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 MTG2Q9H4K7 406 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 NDFIP2Q9NV92 336 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 BCCIPQ9P287 314 aaKnown RBP eCLIP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 AP4E1Q9UPM8 1137 aa18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 SMG5Q9UPR3 1016 aaKnown RBP18.74■□□□□ 0.59
PDLIM7-216ENST00000506537 NYNRINQ9P2P1 1898 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 PLXND1Q9Y4D7 1925 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 DCLK1O15075 740 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 RPP40O75818 363 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 RNF8O76064 485 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 LMNAP02545 664 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 SRPRAP08240 638 aaKnown RBP18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 H2AFZP0C0S5 128 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 TMEM253P0C7T8 217 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 RHOQP17081 205 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 IL1R2P27930 398 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 OR1E1P30953 314 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 COPAP53621 1224 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 CAMK2GQ13555 558 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 H2AFVQ71UI9 128 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 NIPA2Q8N8Q9 360 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 OR7D4Q8NG98 312 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 CTNNBL1Q8WYA6 563 aaPredicted RBP18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 MRGPRX1Q96LB2 322 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 MUC3BQ9H195 1237 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 CD93Q9NPY3 652 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 SLCO3A1Q9UIG8 710 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 VPS28Q9UK41 221 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 USP18Q9UMW8 372 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 INVSQ9Y283 1065 aa18.73■□□□□ 0.59
PDLIM7-216ENST00000506537 OTOGLQ3ZCN5 2332 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 CHD5Q8TDI0 1954 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 TTC34A8MYJ7 566 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 SYNCRIPO60506 623 aaKnown RBP18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 SNAP91O60641 907 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 FECHP22830 423 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 CDC25BP30305 580 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 PCK1P35558 622 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 SIM2Q14190 667 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 LPAL2Q16609 132 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 C6orf118Q5T5N4 469 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 CPNE8Q86YQ8 564 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 FRMD1Q8N878 549 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 KDM1BQ8NB78 822 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 RLN3Q8WXF3 142 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 PANX2Q96RD6 677 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 KCTD15Q96SI1 283 aaPredicted RBP18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 PRSS16Q9NQE7 514 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 TMEM248Q9NWD8 314 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 CTTNBP2NLQ9P2B4 639 aa18.72■□□□□ 0.59
PDLIM7-216ENST00000506537 IP6K2Q9UHH9 426 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms