RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 CDH4P55283 916 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 RPL7AP62424 266 aaKnown RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 RPS24P62847 133 aaKnown RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 NHLH1Q02575 133 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 MESP2Q0VG99 397 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 FOXC1Q12948 553 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 TBX2Q13207 712 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 ACAP1Q15027 740 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 CRY1Q16526 586 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SLC18A3Q16572 532 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 C5orf22Q49AR2 442 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SH3PXD2AQ5TCZ1 1133 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 OTUD1Q5VV17 481 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 TRNP1Q6NT89 227 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 FBXL22Q6P050 247 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SCYL2Q6P3W7 929 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 PKN3Q6P5Z2 889 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 CHST9Q7L1S5 443 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 BNIPLQ7Z465 357 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SLFN11Q7Z7L1 901 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 DNAAF5Q86Y56 855 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 SFTPA1Q8IWL2 248 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 CCAR2Q8N163 923 aaKnown RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.49□□□□□ -1.21
GYPB-206ENST00000506516 IL17RCQ8NAC3 791 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 TSTD1Q8NFU3 115 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 FNIP1Q8TF40 1166 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 P2RY11Q96G91 374 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 PRICKLE1Q96MT3 831 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 OSBPL2Q9H1P3 480 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 RETREG1Q9H6L5 497 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 NHEJ1Q9H9Q4 299 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 ABCB8Q9NUT2 735 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 THAP10Q9P2Z0 257 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 MYO1AQ9UBC5 1043 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 OR12D3Q9UGF7 316 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 EBF1Q9UH73 591 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 GGA2Q9UJY4 613 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 CLEC4EQ9ULY5 219 aa7.49□□□□□ -1.21
GYPB-206ENST00000506516 KIF26AQ9ULI4 1882 aaPredicted RBP7.49□□□□□ -1.21
GYPB-206ENST00000506516 DRGXA6NNA5 263 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 E9PAM4 449 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 SGK1O00141 431 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 CCP110O43303 1012 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 SYNCRIPO60506 623 aaKnown RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 ASLP04424 464 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 DLDP09622 509 aaKnown RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 H2AFZP0C0S5 128 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 HOXB2P14652 356 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 PSMA2P25787 234 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 OR1E1P30953 314 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 CD70P32970 193 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 NNMTP40261 264 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 NBL1P41271 181 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 FNTBP49356 437 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 GALCP54803 685 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 HDAC4P56524 1084 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 ST8SIA6P61647 398 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 GFPT1Q06210 699 aaPredicted RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 LMAN2Q12907 356 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 BYSLQ13895 437 aaKnown RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 STARD3Q14849 445 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 FSCBQ5H9T9 825 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 EFHC2Q5JST6 749 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 RNF219Q5W0B1 726 aaPredicted RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 EGFLAMQ63HQ2 1017 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 MBLAC2Q68D91 279 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 RNF43Q68DV7 783 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 SERPINA13PQ6UXR4 307 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 H2AFVQ71UI9 128 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 KIAA0907Q7Z7F0 614 aaPredicted RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 C14orf80Q86SX3 495 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 WDR5BQ86VZ2 330 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 PGBD3Q8N328 593 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 ZBTB44Q8NCP5 570 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 OLIG1Q8TAK6 271 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 CTNNBL1Q8WYA6 563 aaPredicted RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 NELL1Q92832 810 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 NKD2Q969F2 451 aaPredicted RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 IGSF8Q969P0 613 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 NTAN1Q96AB6 310 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 TTC17Q96AE7 1141 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 MYEOVQ96EZ4 313 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 HHIPQ96QV1 700 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 CHP1Q99653 195 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 GABRG3Q99928 467 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 ZYG11BQ9C0D3 744 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 THAP2Q9H0W7 228 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 ZDHHC4Q9NPG8 344 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 FAM86C1Q9NVL1 165 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 C2orf42Q9NWW7 574 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 DONSONQ9NYP3 566 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 PPARGC1AQ9UBK2 798 aaKnown RBP7.48□□□□□ -1.21
GYPB-206ENST00000506516 SUN2Q9UH99 717 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 LCMT1Q9UIC8 334 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 STON1Q9Y6Q2 735 aa7.48□□□□□ -1.21
GYPB-206ENST00000506516 IGLV3-10A0A075B6K4 115 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 ANTXRLA6NF34 631 aa7.47□□□□□ -1.21
GYPB-206ENST00000506516 GOLGA6L6A8MZA4 724 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms