RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 NME3Q13232 169 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 AUHQ13825 339 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 ELAVL3Q14576 367 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 INAVAQ3KP66 663 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 FBXL22Q6P050 247 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 NCEH1Q6PIU2 408 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 OLFML1Q6UWY5 402 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 FAM183BPQ6ZVS7 135 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 DSG4Q86SJ6 1040 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 STK40Q8N2I9 435 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 C1orf131Q8NDD1 294 aaKnown RBP12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 BAHD1Q8TBE0 780 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 SPAG5Q96R06 1193 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 ORAI3Q9BRQ5 295 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 PDCL3Q9H2J4 239 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 NDST4Q9H3R1 872 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 SIX2Q9NPC8 291 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 TMEM51Q9NW97 253 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 DACH1Q9UI36 760 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 CACNA1BQ00975 2339 aa12.43□□□□□ -0.42
PDLIM7-214ENST00000505746 CHD8Q9HCK8 2581 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 SRRM3A6NNA2 597 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 M0QYT0 321 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 DAB1O75553 588 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 ERBB2P04626 1255 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 ERCC5P28715 1186 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CLCN1P35523 988 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CTSKP43235 329 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 STK19P49842 368 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CCR5P51681 352 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 ZNF177Q13360 481 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 ACCSLQ4AC99 568 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 VWA3BQ502W6 1294 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 FAM46CQ5VWP2 391 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CXorf57Q6NSI4 855 aaKnown RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC26A9Q7LBE3 791 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 SLCO6A1Q86UG4 719 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC47A2Q86VL8 602 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CIR1Q86X95 450 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 FAM71AQ8IYT1 594 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 AADATQ8N5Z0 425 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 TMEM35BQ8NCS4 154 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 ZNF397Q8NF99 534 aaPredicted RBP12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 OR14C36Q8NHC7 312 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 TUBGCP2Q9BSJ2 902 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CHMP5Q9NZZ3 219 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC25A13Q9UJS0 675 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 VANGL2Q9ULK5 521 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 STAP1Q9ULZ2 295 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 PAXBP1Q9Y5B6 917 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 HS3ST4Q9Y661 456 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 CKAP5Q14008 2032 aa12.42□□□□□ -0.42
PDLIM7-214ENST00000505746 MUC22E2RYF6 1773 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 GON4LQ3T8J9 2241 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 ASCC3Q8N3C0 2202 aaKnown RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3DA0A087WVF3 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3IA0A087WXS9 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3EA0A087X179 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3KA0A087X1G2 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3FA6NER0 549 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3LB9A6J9 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 H0Y8X5 98 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 KCNK3O14649 394 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TNFSF14O43557 240 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 PAGE1O75459 146 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 CLDN11O75508 207 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 F9P00740 461 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3HP0C7X1 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 CD38P28907 300 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 ADPRHP54922 357 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 PTPN20Q4JDL3 420 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 BRMS1LQ5PSV4 323 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 ACBD5Q5T8D3 534 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3GQ6DHY5 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3CQ6IPX1 549 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 LAYNQ6UX15 382 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 CCNI2Q6ZMN8 369 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 TBC1D3Q8IZP1 549 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 FRS2Q8WU20 508 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 OR8D1Q8WZ84 308 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 SLC6A18Q96N87 628 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 FEM1AQ9BSK4 669 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 KDM4CQ9H3R0 1056 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 AASDHPPTQ9NRN7 309 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 VPS28Q9UK41 221 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 AJAP1Q9UKB5 411 aaPredicted RBP12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 BTBD3Q9Y2F9 522 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 CEP192Q8TEP8 1941 aa12.41□□□□□ -0.42
PDLIM7-214ENST00000505746 ZFHX4Q86UP3 3567 aa12.4□□□□□ -0.42
PDLIM7-214ENST00000505746 A0A1B0GTQ1 180 aa12.4□□□□□ -0.42
PDLIM7-214ENST00000505746 C10orf142B7Z368 130 aa12.4□□□□□ -0.42
PDLIM7-214ENST00000505746 C1QTNF3-AMACRE9PGA6 284 aa12.4□□□□□ -0.42
PDLIM7-214ENST00000505746 PES1O00541 588 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms