RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 VAV2P52735 878 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 NXPH1P58417 271 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 UFM1P61960 85 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 MRPS21P82921 87 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 TXNL4AP83876 142 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZBED6P86452 979 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 SP2Q02086 613 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 GOLGA8DPQ0D2H9 430 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ALKBH1Q13686 389 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 RASA2Q15283 850 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 PLEKHS1Q5SXH7 462 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 PNPLA1Q8N8W4 532 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 SRFBP1Q8NEF9 429 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 IL17DQ8TAD2 202 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 NCSTNQ92542 709 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 LARP4BQ92615 738 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ATP6V1E2Q96A05 226 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 TRMT61AQ96FX7 289 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 CNDP2Q96KP4 475 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 MAK16Q9BXY0 300 aaKnown RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 ALOXE3Q9BYJ1 711 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 FTOQ9C0B1 505 aaKnown RBP eCLIP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 MGAT4CQ9UBM8 478 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 MORF4L1Q9UBU8 362 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 CORO1CQ9ULV4 474 aaPredicted RBP4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 SH2B3Q9UQQ2 575 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 KCNE2Q9Y6J6 123 aa4.19□□□□□ -1.74
TRAPPC13-208ENST00000505553 XDHP47989 1333 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 LIPT2A6NK58 231 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 MYO1GB0I1T2 1018 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 RNASET2O00584 256 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ERAL1O75616 437 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 SCAF4O95104 1147 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 URODP06132 367 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 DLDP09622 509 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 GLULP15104 373 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 PPP3CBP16298 524 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CXCR5P32302 372 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ACSL1P33121 698 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 HADHAP40939 763 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CPA2P48052 419 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 MVDP53602 400 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 PRAMEP78395 509 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ARHGAP8P85298 464 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 LRMPQ12912 555 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 AIMP2Q13155 320 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 PRPF4BQ13523 1007 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 MYBPC2Q14324 1141 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZNF618Q5T7W0 954 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMEM154Q6P9G4 183 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CNTROBQ8N137 903 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 C17orf53Q8N3J3 647 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 SIRT6Q8N6T7 355 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ENDOVQ8N8Q3 282 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ADPRHL1Q8NDY3 354 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 SSH3Q8TE77 659 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CLEC4CQ8WTT0 213 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CACTINQ8WUQ7 758 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 XAGE5Q8WWM1 108 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 ARHGEF2Q92974 986 aaKnown RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CTHRC1Q96CG8 243 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 R3HDM4Q96D70 268 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 WDYHV1Q96HA8 205 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 SPATA17Q96L03 361 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 HTATIP2Q9BUP3 242 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 NPLQ9BXD5 320 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CTDSP1Q9GZU7 261 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDCP1Q9H5V8 836 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 MMRN2Q9H8L6 949 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 PCDHB16Q9NRJ7 776 aa4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 CHORDC1Q9UHD1 332 aaPredicted RBP4.18□□□□□ -1.74
TRAPPC13-208ENST00000505553 TEX13CA0A0J9YWL9 993 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 GCOM1H8Y6P7 765 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 SYN3O14994 580 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 BCAT2O15382 392 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CA12O43570 354 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 SPRY2O43597 315 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 HNRNPCL1O60812 293 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 ERBB2P04626 1255 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 EIF2S1P05198 315 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 FESP07332 822 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 PDHA1P08559 390 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 TMIGD3P0DMS9 266 aaPredicted RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CYP4B1P13584 511 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 IGFBP2P18065 325 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 ITGB6P18564 788 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 BMP5P22003 454 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 DUSP1P28562 367 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 MCM5P33992 734 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CTNNA1P35221 906 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 HNF1BP35680 557 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 EIF2DP41214 584 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 KRT83P78385 493 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CCDC15Q0P6D6 951 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 EIF2B5Q13144 721 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 TREML2Q5T2D2 321 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 HECTD3Q5T447 861 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 ZKSCAN2Q63HK3 967 aa4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 RPUSD3Q6P087 351 aaKnown RBP4.17□□□□□ -1.74
TRAPPC13-208ENST00000505553 CDC73Q6P1J9 531 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms