RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ADGRF1Q5T601 910 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 C9orf64Q5T6V5 341 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 KIAA1614Q5VZ46 1190 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 MBLAC2Q68D91 279 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 NEK5Q6P3R8 708 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 LYPD8Q6UX82 237 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 CLEC20AQ6ZU45 233 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 STXBP4Q6ZWJ1 553 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 CHST9Q7L1S5 443 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 DCP2Q8IU60 420 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 C12orf56Q8IXR9 622 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 FAM26EQ8N5C1 309 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 TMEM145Q8NBT3 493 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 WDR36Q8NI36 951 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 FIBINQ8TAL6 211 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 ZNF507Q8TCN5 953 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 DDI1Q8WTU0 396 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 SORCS1Q8WY21 1168 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 ERLEC1Q96DZ1 483 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 TMA16Q96EY4 203 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 NAF1Q96HR8 494 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 FAXDC2Q96IV6 333 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 FAM129BQ96TA1 746 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 ARID3AQ99856 593 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 MED10Q9BTT4 135 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 SLC25A18Q9H1K4 315 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 AASDHPPTQ9NRN7 309 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 KRT82Q9NSB4 513 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 HSPBP1Q9NZL4 362 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 CCDC39Q9UFE4 941 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 MAN2B2Q9Y2E5 1009 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 HBS1LQ9Y450 684 aaKnown RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 MORC2Q9Y6X9 1032 aaPredicted RBP6.25□□□□□ -1.41
GYPB-204ENST00000504951 U3KQA8 63 aa6.25□□□□□ -1.41
GYPB-204ENST00000504951 PLXNA2O75051 1894 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 ANKRD17O75179 2603 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 BOD1L1Q8NFC6 3051 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 A0A1B0GVM2 712 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 EME2A4GXA9 379 aaPredicted RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 TPP1O14773 563 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 EIF3DO15371 548 aaKnown RBP eCLIP6.24□□□□□ -1.41
GYPB-204ENST00000504951 CYP26A1O43174 497 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 NOBOXO60393 691 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 PPFIA2O75334 1257 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 PIAS2O75928 621 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 C4BPAP04003 597 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 BMP2P12643 396 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 P4HA1P13674 534 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 TNNI1P19237 187 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 POLR2EP19388 210 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 TRIM21P19474 475 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 CASP1P29466 404 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SLC8A1P32418 973 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 ADPRHP54922 357 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 MAP3K7CLP57077 242 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 MYL6P60660 151 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 DAB2P98082 770 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 CYP24A1Q07973 514 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 INCA1Q0VD86 236 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 TRPC3Q13507 836 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 STAT4Q14765 748 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SLC39A14Q15043 492 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SNRNP35Q16560 246 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 SGSM1Q2NKQ1 1148 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 ZNF667Q5HYK9 610 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 RAB41Q5JT25 222 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 PM20D1Q6GTS8 502 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 CNNM4Q6P4Q7 775 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 CCDC73Q6ZRK6 1079 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 EPM2AIP1Q7L775 607 aaPredicted RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 BPHLQ86WA6 291 aaPredicted RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 DENND1CQ8IV53 801 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 ZC3H3Q8IXZ2 948 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 PLEKHO2Q8TD55 490 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SLC2A14Q8TDB8 520 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 CCDC127Q96BQ5 260 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 LIN37Q96GY3 246 aaPredicted RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 APOLD1Q96LR9 279 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 OMDQ99983 421 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 ABCG4Q9H172 646 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 OLA1Q9NTK5 396 aaKnown RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 MARCH2Q9P0N8 246 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SERGEFQ9UGK8 458 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 CYTH4Q9UIA0 394 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SALL4Q9UJQ4 1053 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 GGA2Q9UJY4 613 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 NAGPAQ9UK23 515 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 STRIP2Q9ULQ0 834 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 SATB2Q9UPW6 733 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 MTMR6Q9Y217 621 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 ENTPD2Q9Y5L3 495 aa6.24□□□□□ -1.41
GYPB-204ENST00000504951 TP53BP1Q12888 1972 aaPredicted RBP6.24□□□□□ -1.41
GYPB-204ENST00000504951 SPTBN1Q01082 2364 aaKnown RBP6.23□□□□□ -1.41
GYPB-204ENST00000504951 CCDC187A0A096LP49 1063 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 EDDM13A0A1B0GTR0 161 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 A0A1W2PP55 124 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 SLC12A8A0AV02 714 aa6.23□□□□□ -1.41
GYPB-204ENST00000504951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms