RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RNF186Q9NXI6 227 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 DNAJC16Q9Y2G8 782 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 OR6C75A6NL08 312 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 EIF4E1BA6NMX2 242 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 SLC10A3P09131 477 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 RALBP11234 206 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 AGAP9Q5VTM2 703 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 MAMDC4Q6UXC1 1216 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 UNC5AQ6ZN44 842 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 MREGQ8N565 214 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 SLC26A7Q8TE54 656 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 VAT1Q99536 393 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 THTPAQ9BU02 230 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 AGO3Q9H9G7 860 aaKnown RBP14.39□□□□□ -0.11
TCOF1-207ENST00000504761 IRAK4Q9NWZ3 460 aa14.39□□□□□ -0.11
TCOF1-207ENST00000504761 DDX60Q8IY21 1712 aaKnown RBP14.38□□□□□ -0.11
TCOF1-207ENST00000504761 MEIS3P2A8K0S8 358 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 MTA2O94776 668 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 LRIG2O94898 1065 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 CRTAMO95727 393 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 SERPINB4P48594 390 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 RGS4P49798 205 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 AQP5P55064 265 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 ANKRD22Q5VYY1 191 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 RFWD3Q6PCD5 774 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 PRPF39Q86UA1 669 aaKnown RBP14.38□□□□□ -0.11
TCOF1-207ENST00000504761 TAC4Q86UU9 113 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 IFNEQ86WN2 208 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 SPPL2BQ8TCT7 592 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 ADGRE3Q9BY15 652 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 XYLT2Q9H1B5 865 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 A0A0U1RQF3 1178 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 CXCL14O95715 111 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 DAOAP59103 153 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 FUKQ8N0W3 1084 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 PCDH19Q8TAB3 1148 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 SNX19Q92543 992 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 LRRC4CQ9HCJ2 640 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 FGF10O15520 208 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-207ENST00000504761 TBX18O95935 607 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 CD151P48509 253 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 GDF10P55107 478 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 TAF11Q15544 211 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 C6orf10Q5SRN2 563 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 CLEC20AQ6ZU45 233 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 DDX1Q92499 740 aaKnown RBP14.38□□□□□ -0.11
TCOF1-207ENST00000504761 TSPAN18Q96SJ8 248 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 NFKBIZQ9BYH8 718 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 GPR88Q9GZN0 384 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 POLR1EQ9GZS1 481 aaKnown RBP14.38□□□□□ -0.11
TCOF1-207ENST00000504761 PDLIM7Q9NR12 457 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 ARHGEF4Q9NR80 690 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 Q9Y3F1 56 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 L3MBTL1Q9Y468 752 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 LRP5O75197 1615 aa14.38□□□□□ -0.11
TCOF1-207ENST00000504761 ABCA3Q99758 1704 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 CFAP99D6REC4 459 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 TCN1P20061 433 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 MAP4P27816 1152 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 GABRR2P28476 465 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ENPEPQ07075 957 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 SPATA24Q86W54 205 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ILKAPQ9H0C8 392 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ZCWPW1Q9H0M4 648 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 TMPRSS4Q9NRS4 437 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 PLA2G4CQ9UP65 541 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 MTO1Q9Y2Z2 717 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 TCRBV9S1A1TA0A576 114 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ESRRBO95718 433 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ZNF865P0CJ78 1059 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 HADHBP55084 474 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 HFE2Q6ZVN8 426 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 EXOC3L1Q86VI1 746 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 OSTM1Q86WC4 334 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 MAB21L3Q8N8X9 362 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 SPDL1Q96EA4 605 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 MCRS1Q96EZ8 462 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 HAO1Q9UJM8 370 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 MAGEB16A2A368 324 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 TLL1O43897 1013 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 NPY2RP49146 381 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 POM121L1PQ3SYA9 428 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 VSTM1Q6UX27 236 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 RGS9BPQ6ZS82 235 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 OTOP3Q7RTS5 596 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 LONP2Q86WA8 852 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 CPT1BQ92523 772 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 FLRT1Q9NZU1 646 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 UXTQ9UBK9 157 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 SEPT3Q9UH03 358 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 A0A1W2PPM1 405 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ARVCFO00192 962 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 ANP32DO95626 131 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 WARSP23381 471 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 PLPP4Q5VZY2 271 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms