RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TBX10O75333 385 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 SASH3O75995 380 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 TMEM63AO94886 807 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 FGF19O95750 216 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 GAS8O95995 478 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 TUBBP07437 444 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 PTPN3P26045 913 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 HOXD9P28356 352 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 WEE1P30291 646 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 GARSP41250 739 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 ATP5OP48047 213 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 RPS24P62847 133 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 GAD2Q05329 585 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 ZBTB17Q13105 803 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 MTA1Q13330 715 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 ADGRE1Q14246 886 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 PPP1R7Q15435 360 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CTC1Q2NKJ3 1217 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 ACBD5Q5T8D3 534 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 ANKRD22Q5VYY1 191 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CXorf57Q6NSI4 855 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 HIBCHQ6NVY1 386 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 RWDD4Q6NW29 188 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 HTR3DQ70Z44 454 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 PDZD4Q76G19 769 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 GPR149Q86SP6 731 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 BBS7Q8IWZ6 715 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CMTM8Q8IZV2 173 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 LGI2Q8N0V4 545 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CPT1BQ92523 772 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 SMG7Q92540 1137 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 MAML1Q92585 1016 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 PRCCQ92733 491 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 CAVIN3Q969G5 261 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 HMCESQ96FZ2 354 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 LRRC3BQ96PB8 259 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 TSGA13Q96PP4 275 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 WDR83Q9BRX9 315 aaKnown RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 EPB41L4BQ9H329 900 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 ZNF576Q9H609 170 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CATSPERBQ9H7T0 1116 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 FAM114A2Q9NRY5 505 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 DZANK1Q9NVP4 752 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 CLEC1BQ9P126 229 aa10.67□□□□□ -0.7
TPM3-217ENST00000504663 ZFP37Q9Y6Q3 630 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 MUC22E2RYF6 1773 aaPredicted RBP10.67□□□□□ -0.7
TPM3-217ENST00000504663 A0A0A0MRY4 1105 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 F5H5T6 163 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 SGK1O00141 431 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 KCNN4O15554 427 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 GCATO75600 419 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 METTL18O95568 372 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CKMP06732 381 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 POU3F3P20264 500 aaPredicted RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 FCARP24071 287 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CD68P34810 354 aaPredicted RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 SERPINB6P35237 376 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CHKAP35790 457 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 LTBRP36941 435 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 MAGEA6P43360 314 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 HARS2P49590 506 aaKnown RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 VPS41P49754 854 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 ITGA8P53708 1063 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 LMNB2Q03252 620 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 ADAM15Q13444 863 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 KCNJ11Q14654 390 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 PDK1Q15118 436 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 UAP1Q16222 522 aaPredicted RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 P3H1Q32P28 736 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 ADGRF1Q5T601 910 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 IZUMO3Q5VZ72 239 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CCDC70Q6NSX1 233 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 ANKRD54Q6NXT1 300 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 DARS2Q6PI48 645 aaKnown RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 TMC5Q6UXY8 1006 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 ZNF534Q76KX8 674 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 TFAP2DQ7Z6R9 452 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 NPAS3Q8IXF0 933 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CFAP52Q8N1V2 620 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CPXM2Q8N436 756 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 LZTR1Q8N653 840 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 CCDC89Q8N998 374 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 NAT8LQ8N9F0 302 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 TSEN2Q8NCE0 465 aaKnown RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 CCDC110Q8TBZ0 833 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 WFDC5Q8TCV5 224 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 SH3RF2Q8TEC5 729 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 TFB1MQ8WVM0 346 aaKnown RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 HTR3CQ8WXA8 447 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 ING5Q8WYH8 240 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 SNF8Q96H20 258 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 LMLNQ96KR4 655 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 PWWP2AQ96N64 755 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 SPATA13Q96N96 652 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 RPRD1AQ96P16 312 aaPredicted RBP10.66□□□□□ -0.7
TPM3-217ENST00000504663 GCNAQ96QF7 691 aa10.66□□□□□ -0.7
TPM3-217ENST00000504663 NACA2Q9H009 215 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms