RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ENDOD1O94919 500 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 IGHV4-34P06331 123 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 UNGP13051 313 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 CEACAM1P13688 526 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 VAV1P15498 845 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 PDGFRAP16234 1089 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 ABCB4P21439 1286 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 SOX5P35711 763 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 GSCP56915 257 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 POLR2FP61218 127 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 ECT2LQ008S8 904 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 GRIK2Q13002 908 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 NME3Q13232 169 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 SLC12A1Q13621 1099 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 SLC25A52Q3SY17 297 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 ALFQ53S48 1182 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 WDR45BQ5MNZ6 344 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 BRMS1LQ5PSV4 323 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 ZNF776Q68DI1 518 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 USP30Q70CQ3 517 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM124AQ86V42 546 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 DHX40Q8IX18 779 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 ZCCHC9Q8N567 271 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 MINDY1Q8N5J2 469 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 CPA5Q8WXQ8 436 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 RPL10LQ96L21 214 aaKnown RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 ERGIC2Q96RQ1 377 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 PSMB7Q99436 277 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 EBF2Q9HAK2 575 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM207AQ9NSI2 230 aaPredicted RBP14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 VANGL2Q9ULK5 521 aa14.42□□□□□ -0.1
PDLIM7-211ENST00000504318 A0A1B0GTW7 788 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 TCRBV5S1A1TA0A578 114 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 TARSL2A2RTX5 802 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 DRGXA6NNA5 263 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 MID1O15344 667 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 ACADMP11310 421 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 MMP8P22894 467 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 NUMBP49757 651 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 METAP1P53582 386 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM193AP78312 1265 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 CDR2Q01850 454 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 MYL5Q02045 173 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 GFPT1Q06210 699 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 SYCP1Q15431 976 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 STX1AQ16623 288 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 UAP1L1Q3KQV9 507 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 SYCP2LQ5T4T6 812 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 FAM102AQ5T9C2 384 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 NAA35Q5VZE5 725 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 ERICH1Q86X53 443 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 ZNF677Q86XU0 584 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 RGL4Q8IZJ4 473 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 AADATQ8N5Z0 425 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 DEFB124Q8NES8 71 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 BIRC7Q96CA5 298 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 RPRD1AQ96P16 312 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 FEM1AQ9BSK4 669 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 TMEM121BQ9BXQ6 578 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 TKTL2Q9H0I9 626 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 OSGEPQ9NPF4 335 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 ANO10Q9NW15 660 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 SUSD2Q9UGT4 822 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 ADAMTS1Q9UHI8 967 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 SLC12A6Q9UHW9 1150 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 EIF2B4Q9UI10 523 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 NEU3Q9UQ49 428 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 DAAM1Q9Y4D1 1078 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 CEP83Q9Y592 693 aa14.41□□□□□ -0.1
PDLIM7-211ENST00000504318 EDDM13A0A1B0GTR0 161 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 MEI4A8MW99 385 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 PES1O00541 588 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 ATP9BO43861 1147 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SEMA4FO95754 770 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 ATP1A3P13637 1013 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 DRD3P35462 400 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SULT1E1P49888 294 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SNX16P57768 344 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 RNASE9P60153 205 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 MTA1Q13330 715 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 CST6Q15828 149 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 RABGAP1LQ5R372 815 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 CCDC183Q5T5S1 534 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 DBX2Q6ZNG2 339 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 STK40Q8N2I9 435 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 C1orf74Q96LT6 269 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 CFAP57Q96MR6 1250 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SYT11Q9BT88 431 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 BTBD1Q9H0C5 482 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SYNCQ9H7C4 482 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 IL21RQ9HBE5 538 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SGK2Q9HBY8 427 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 NLRC4Q9NPP4 1024 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 STAP1Q9ULZ2 295 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 SCML1Q9UN30 329 aa14.4□□□□□ -0.1
PDLIM7-211ENST00000504318 CACNA1BQ00975 2339 aa14.4□□□□□ -0.11
PDLIM7-211ENST00000504318 ZFHX4Q86UP3 3567 aa14.39□□□□□ -0.11
PDLIM7-211ENST00000504318 BCAT2O15382 392 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-211ENST00000504318 CBFA2T3O75081 653 aa14.39□□□□□ -0.11
PDLIM7-211ENST00000504318 CLDN11O75508 207 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms