RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MRPL47Q9HD33 250 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PPP4R1LQ9P1A2 415 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ADAMTS1Q9UHI8 967 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RWDD2AQ9UIY3 292 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CORO2BQ9UQ03 480 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 NEDD4P46934 1319 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SH3TC1Q8TE82 1336 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 POLR1AO95602 1720 aaPredicted RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RICTORQ6R327 1708 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 NPIPA5A0A0B4J1W7 369 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TSTD3H0UI37 97 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DHFRP00374 187 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GNAI2P04899 355 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GRIK1P39086 918 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CDK7P50613 346 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RAB2AP61019 212 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SLC6A19Q695T7 634 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TMPRSS9Q7Z410 1059 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TTC6Q86TZ1 520 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TREML1Q86YW5 311 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ELMOD1Q8N336 334 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CCDC185Q8N715 623 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 LEMD2Q8NC56 503 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 STOML3Q8TAV4 291 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CORO2AQ92828 525 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GPR61Q9BZJ8 451 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 OR2B2Q9GZK3 357 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CERS4Q9HA82 394 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 C17orf75Q9HAS0 396 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CREBZFQ9NS37 354 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CABP1Q9NZU7 370 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GINS2Q9Y248 185 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 A6NJ64 397 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 VPS4BO75351 444 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 HTR3BO95264 441 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 LYNP07948 512 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 APEHP13798 732 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 MAP3K8P41279 467 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DNAL1Q4LDG9 190 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 FASTKD1Q53R41 847 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RARS2Q5T160 578 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 LRRC74BQ6ZQY2 392 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 NPAS4Q8IUM7 802 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TMIEQ8NEW7 156 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ATP6V1C2Q8NEY4 427 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PLEKHO2Q8TD55 490 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 AFG1LQ8WV93 481 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RBM4BQ9BQ04 359 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RIOK2Q9BVS4 552 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RBM4Q9BWF3 364 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF416Q9BWM5 594 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PPA2Q9H2U2 334 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RNPEPL1Q9HAU8 725 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SP110Q9HB58 689 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 AGPAT5Q9NUQ2 364 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CYP39A1Q9NYL5 469 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ACTR10Q9NZ32 417 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CNTN3Q9P232 1028 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PCDHB2Q9Y5E7 798 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SNX9Q9Y5X1 595 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 NR2E3Q9Y5X4 410 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CYP46A1Q9Y6A2 500 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PIPSLA2A3N6 862 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 FUOMA2VDF0 154 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ARGFXA6NJG6 315 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 MINDY4BA8MYZ0 360 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 L7N2F9 121 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TCAPO15273 167 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SPOPO43791 374 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CTSHP09668 335 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RXRAP19793 462 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 PTBP1P26599 531 aaKnown RBP eCLIP6.36□□□□□ -1.396e-31■■■■■ 52.4
CLCN3-204ENST00000504131 PKLRP30613 574 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SYKP43405 635 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ADCY7P51828 1080 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 DGKQP52824 942 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 EIF3BP55884 814 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 VAMP2P63027 116 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SREBF2Q12772 1141 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM28Q13263 835 aaKnown RBP6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ITIH4Q14624 930 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GRIN2CQ14957 1233 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TMED2Q15363 201 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TAZQ16635 292 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 STXBP5Q5T5C0 1151 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 MEI1Q5TIA1 1274 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 FAM91A1Q658Y4 838 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TLDC1Q6P9B6 456 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ZDHHC17Q8IUH5 632 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 RTKN2Q8IZC4 609 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 CENPSQ8N2Z9 138 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 SPATA6LQ8N4H0 392 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 BANPQ8N9N5 519 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF248Q8NDW4 579 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GAL3ST3Q96A11 431 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 AP2M1Q96CW1 435 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TSGA13Q96PP4 275 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 TIPINQ9BVW5 301 aa6.36□□□□□ -1.39
CLCN3-204ENST00000504131 GORASP2Q9H8Y8 452 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms