RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 AADATQ8N5Z0 425 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 TMEM35BQ8NCS4 154 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 RPRD1AQ96P16 312 aaPredicted RBP16.76■□□□□ 0.27
SCLT1-204ENST00000503215 PCED1AQ9H1Q7 454 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 VPS16Q9H269 839 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 GAREM1Q9H706 876 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 EBF2Q9HAK2 575 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 TM9SF3Q9HD45 589 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
SCLT1-204ENST00000503215 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 A0A1B0GVM2 712 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 TCAF2A6NFQ2 919 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 EPHB6O15197 1021 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 CNTN5O94779 1100 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 MOCS3O95396 460 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 MMEP08473 750 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 SLC8A1P32418 973 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 PSMD8P48556 350 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 CXCR3P49682 368 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 PLK1P53350 603 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 GALCP54803 685 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 BPIFB4P59827 614 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 TTC31Q49AM3 519 aaPredicted RBP16.75■□□□□ 0.27
SCLT1-204ENST00000503215 ARTNQ5T4W7 220 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 NCEH1Q6PIU2 408 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 XYLT1Q86Y38 959 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 KDM1BQ8NB78 822 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
SCLT1-204ENST00000503215 FRS2Q8WU20 508 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 SLC20A1Q8WUM9 679 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 CPA5Q8WXQ8 436 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 TBCBQ99426 244 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 FEM1AQ9BSK4 669 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 TMEM121BQ9BXQ6 578 aaPredicted RBP16.75■□□□□ 0.27
SCLT1-204ENST00000503215 ZDHHC5Q9C0B5 715 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 GANQ9H2C0 597 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 SGK2Q9HBY8 427 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■■■■□ 24
SCLT1-204ENST00000503215 OR51B4Q9Y5P0 310 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 SNX11Q9Y5W9 270 aa16.75■□□□□ 0.27
SCLT1-204ENST00000503215 AKAP13Q12802 2813 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 IGF2RP11717 2491 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 EDDM13A0A1B0GTR0 161 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 TARSL2A2RTX5 802 aaKnown RBP16.74■□□□□ 0.27
SCLT1-204ENST00000503215 F8VZ95 297 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 GABRB2P47870 512 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 SLC14A1Q13336 389 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 KRT31Q15323 416 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 RAB6CQ53S08 254 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 ALFQ53S48 1182 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 RABGAP1LQ5R372 815 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 CDKAL1Q5VV42 579 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 RNF219Q5W0B1 726 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-204ENST00000503215 KIAA0895LQ68EN5 471 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 USP30Q70CQ3 517 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 PHLDB2Q86SQ0 1253 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 ERICH1Q86X53 443 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 NAXDQ8IW45 347 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 ZNF683Q8IZ20 524 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 CHCHD4Q8N4Q1 142 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 NT5C3BQ969T7 300 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 C18orf8Q96DM3 657 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 STK33Q9BYT3 514 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 RAB6CQ9H0N0 254 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 ARHGEF38Q9NXL2 777 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 KLK13Q9UKR3 277 aa16.74■□□□□ 0.27
SCLT1-204ENST00000503215 C10orf142B7Z368 130 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 GOLGA8SH3BPF8 625 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 WNT9AO14904 365 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 CBFA2T3O75081 653 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 RNASEH2AO75792 299 aaKnown RBP16.73■□□□□ 0.27
SCLT1-204ENST00000503215 CHRNB2P17787 502 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 EEF1GP26641 437 aaKnown RBP16.73■□□□□ 0.27
SCLT1-204ENST00000503215 CD27P26842 260 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 FLT3P36888 993 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 SULT1E1P49888 294 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 AFF3P51826 1226 aaKnown RBP16.73■□□□□ 0.27
SCLT1-204ENST00000503215 TRIP6Q15654 476 aaKnown RBP16.73■□□□□ 0.27
SCLT1-204ENST00000503215 C5orf22Q49AR2 442 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 FAM102AQ5T9C2 384 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-204ENST00000503215 NAA35Q5VZE5 725 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 SMYD5Q6GMV2 418 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 PNPLA1Q8N8W4 532 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 EPS8L1Q8TE68 723 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 TM7SF3Q9NS93 570 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 FANCLQ9NW38 375 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 NOCTQ9UK39 431 aaKnown RBP16.73■□□□□ 0.27
SCLT1-204ENST00000503215 SARDHQ9UL12 918 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 NCKAP1Q9Y2A7 1128 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 ANKRD6Q9Y2G4 727 aa16.73■□□□□ 0.27
SCLT1-204ENST00000503215 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-204ENST00000503215 SNAP91O60641 907 aa16.72■□□□□ 0.27
SCLT1-204ENST00000503215 RNASEH1O60930 286 aaKnown RBP16.72■□□□□ 0.27
SCLT1-204ENST00000503215 GFPT2O94808 682 aa16.72■□□□□ 0.27
SCLT1-204ENST00000503215 MT-CO1P00395 513 aa16.72■□□□□ 0.27
SCLT1-204ENST00000503215 SNX16P57768 344 aa16.72■□□□□ 0.27
SCLT1-204ENST00000503215 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
SCLT1-204ENST00000503215 NOMO3P69849 1222 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms