RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CENPLQ8N0S6 344 aaPredicted RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 MFSD14AQ96MC6 490 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 MICAL2O94851 1124 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 MT-CO1P00395 513 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SNRPB2P08579 225 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 RPL26P61254 145 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 IL5RAQ01344 420 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SQLEQ14534 574 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 ATG4CQ96DT6 458 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 RNF145Q96MT1 663 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 PRDM16Q9HAZ2 1276 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 VPS45Q9NRW7 570 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 DNAAF2Q9NVR5 837 aaKnown RBP17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SLC7A8Q9UHI5 535 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 PCDHGB4Q9UN71 923 aa17.54■□□□□ 0.4
HMGXB3-201ENST00000502717 SERPINI2O75830 405 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 BAIAP3O94812 1187 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 MED26O95402 600 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 IFNA8P32881 189 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 BCAT1P54687 386 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 FNBP1LQ5T0N5 605 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 MIER2Q8N344 545 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 CERS2Q96G23 380 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 ZFYVE19Q96K21 471 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 PPP1R10Q96QC0 940 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 CASS4Q9NQ75 786 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 DDX4Q9NQI0 724 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 NDFIP2Q9NV92 336 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 ANAPC2Q9UJX6 822 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TPRKBQ9Y3C4 175 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TRIM24O15164 1050 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 VAPBO95292 243 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 ZNF143P52747 638 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 INSCQ1MX18 579 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 MRNIPQ6NTE8 343 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 EFCAB12Q6NXP0 572 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM83AQ86UY5 434 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 HEATR4Q86WZ0 1026 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 SCN4BQ8IWT1 228 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TEX12Q9BXU0 123 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 PIH1D1Q9NWS0 290 aaKnown RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TEKT2Q9UIF3 430 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 BARX2Q9UMQ3 279 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 SNCAIPQ9Y6H5 919 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 A0A0A0MRY4 1105 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 RHOBTB1O94844 696 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TAGAPQ8N103 731 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM47BQ8NA70 645 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 SETD9Q8NE22 299 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 RDH11Q8TC12 318 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 S100ZQ8WXG8 99 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 SPATA13Q96N96 652 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 PXMP2Q9NR77 195 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 ZNF862O60290 1169 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TAF5Q15542 800 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 ARMCX4Q5H9R4 360 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 PACS1Q6VY07 963 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 AMIGO2Q86SJ2 522 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 C8orf59Q8N0T1 100 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 CHST13Q8NET6 341 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 HELQQ8TDG4 1101 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 CEP44Q9C0F1 390 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 AJAP1Q9UKB5 411 aaPredicted RBP17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 SLC13A4Q9UKG4 626 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 TSPAN16Q9UKR8 245 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 MYH8P13535 1937 aa17.53■□□□□ 0.4
HMGXB3-201ENST00000502717 AVILO75366 819 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 ALOX5P09917 674 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 ADSSP30520 456 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 TOP3AQ13472 1001 aaPredicted RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 DEPDC1Q5TB30 811 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 TTC23Q5W5X9 447 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 MAGEE2Q8TD90 523 aaPredicted RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 PABPC5Q96DU9 382 aaKnown RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 EIF3LQ9Y262 564 aaKnown RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM32AQ9Y421 112 aaKnown RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 HBP1O60381 514 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 JCHAINP01591 159 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 NCAM1P13591 858 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 CHRNB2P17787 502 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 ECHS1P30084 290 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 NAA20P61599 178 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 TDRD10Q5VZ19 366 aaKnown RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 ZDHHC13Q8IUH4 622 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 TRHDEQ9UKU6 1024 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 PLSCR1O15162 318 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 F9P00740 461 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 MMP8P22894 467 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 GRIA4P48058 902 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 ZNF846Q147U1 533 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 CMPK2Q5EBM0 449 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 FAM43BQ6ZT52 329 aaPredicted RBP17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 DMAC2Q9NW81 257 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 POMPQ9Y244 141 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 RAD54BQ9Y620 910 aa17.52■□□□□ 0.4
HMGXB3-201ENST00000502717 PNMA8CA0A1B0GUJ8 204 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 ADAMTS3O15072 1205 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms