RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 SERPINB8P50452 374 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 RAP1GDS1P52306 607 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 CACNA2D1P54289 1103 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 NAA25Q14CX7 972 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 PPM1JQ5JR12 505 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 C10orf107Q8IVU9 208 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 IRGQQ8WZA9 623 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 NAF1Q96HR8 494 aaKnown RBP16.95■□□□□ 0.3
VCAN-204ENST00000502527 SNX15Q9NRS6 342 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 TMEM30AQ9NV96 361 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 COPG2Q9UBF2 871 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 OR12D3Q9UGF7 316 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 GIT1Q9Y2X7 761 aa16.95■□□□□ 0.3
VCAN-204ENST00000502527 ARL5CA6NH57 179 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 ITM2AO43736 263 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 LYPLA1O75608 230 aaPredicted RBP16.94■□□□□ 0.3
VCAN-204ENST00000502527 LUC7L3O95232 432 aaKnown RBP16.94■□□□□ 0.3
VCAN-204ENST00000502527 CPA2P48052 419 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 CDK7P50613 346 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 LIMK2P53671 638 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 OLIG2Q13516 323 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 RCN2Q14257 317 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 DNAL1Q4LDG9 190 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 ANKRD20A4Q4UJ75 823 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 STRA8Q7Z7C7 330 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 DCLK2Q8N568 766 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 C3orf58Q8NDZ4 430 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 TKTL2Q9H0I9 626 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 CSNK1G1Q9HCP0 422 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 MIOSQ9NXC5 875 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 TMEM216Q9P0N5 145 aa16.94■□□□□ 0.3
VCAN-204ENST00000502527 AP3B1O00203 1094 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 PRKCGP05129 697 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 CD68P34810 354 aaPredicted RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 AFF1P51825 1210 aaKnown RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 SMAD1Q15797 465 aaKnown RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 CCDC6Q16204 474 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 ACSBG2Q5FVE4 666 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 BHLHA9Q7RTU4 235 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 EDEM1Q92611 657 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 STMN2Q93045 179 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 LPPQ93052 612 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 ZNF778Q96MU6 729 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 EBF4Q9BQW3 602 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 APOBEC2Q9Y235 224 aaKnown RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 TRIP12Q14669 1992 aaPredicted RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 ZCWPW2A0A1B0GU75 182 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 MPOP05164 745 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 RALBP11234 206 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 CPA3P15088 417 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 AOC1P19801 751 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 GCKP35557 465 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 KDSRQ06136 332 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 ZBTB17Q13105 803 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 PRPSAP1Q14558 356 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 DCLRE1AQ6PJP8 1040 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 RBM15BQ8NDT2 890 aaKnown RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 TEKT5Q96M29 485 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 APBA2Q99767 749 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 MLPHQ9BV36 600 aaPredicted RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 IL22Q9GZX6 179 aa16.93■□□□□ 0.3
VCAN-204ENST00000502527 MYO18AQ92614 2054 aaKnown RBP16.93■□□□□ 0.3
VCAN-204ENST00000502527 CASTOR2A6NHX0 329 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 ARHGAP42A6NI28 874 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 PRR5-ARHGAP8B1AHC4 643 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 LRIG2O94898 1065 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 KLHL2O95198 593 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 PSMG1O95456 288 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 C6orf222P0C671 652 aaPredicted RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 ODC1P11926 461 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 AKR1A1P14550 325 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 NFKB1P19838 968 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 SCNN1GP51170 649 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 ABCE1P61221 599 aaKnown RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 COG7P83436 770 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 ARHGAP8P85298 464 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 RCN1Q15293 331 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 TAF1CQ15572 869 aaPredicted RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 UPP1Q16831 310 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 TSNAXIP1Q2TAA8 658 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 TIGD5Q53EQ6 642 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 CMPK2Q5EBM0 449 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 PM20D1Q6GTS8 502 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 FSTL4Q6MZW2 842 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 CTU1Q7Z7A3 348 aaKnown RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 CMC1Q7Z7K0 106 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 METTL23Q86XA0 190 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 RNF34Q969K3 372 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 MYLPFQ96A32 169 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 MTG1Q9BT17 334 aaPredicted RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 C1orf21Q9H246 121 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 PSMD3O43242 534 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 TIMM44O43615 452 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 HARS2P49590 506 aaKnown RBP16.92■□□□□ 0.3
VCAN-204ENST00000502527 ZNF33AQ06730 810 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 TUBB3Q13509 450 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 HSP90AA5PQ58FG0 334 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 CERCAMQ5T4B2 595 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 AGMOQ6ZNB7 445 aa16.92■□□□□ 0.3
VCAN-204ENST00000502527 WDR60Q8WVS4 1066 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms