RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 SLC35C1Q96A29 364 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 TTC17Q96AE7 1141 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 BIRC7Q96CA5 298 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 ACE2Q9BYF1 805 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 RSPH9Q9H1X1 276 aaPredicted RBP11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 FBXL12Q9NXK8 326 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 STIM2Q9P246 746 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 SNX11Q9Y5W9 270 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 AKAP13Q12802 2813 aa11.54□□□□□ -0.56
UBE2D3-211ENST00000502404 ANKRD11Q6UB99 2663 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 ZZEF1O43149 2961 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 CAPN9O14815 690 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 CAPNS1P04632 268 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 SRPRAP08240 638 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 CD70P32970 193 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 BNC1Q01954 994 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 HNRNPA1L2Q32P51 320 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 SLC45A4Q5BKX6 768 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 PMF1Q6P1K2 205 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 RFWD3Q6PCD5 774 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 CARNMT1Q8N4J0 409 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 ZNF366Q8N895 744 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 BAHD1Q8TBE0 780 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 TIGD1Q96MW7 591 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 PPP1R9BQ96SB3 815 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 OMDQ99983 421 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 PABPC3Q9H361 631 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 CEP83Q9Y592 693 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 PCDHGA11Q9Y5H2 935 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 ZFYVE26Q68DK2 2539 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 KNL1Q8NG31 2342 aa11.53□□□□□ -0.56
UBE2D3-211ENST00000502404 CABIN1Q9Y6J0 2220 aa11.52□□□□□ -0.56
UBE2D3-211ENST00000502404 CKAP5Q14008 2032 aa11.52□□□□□ -0.56
UBE2D3-211ENST00000502404 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 GOLGA6L7A0A1B0GV03 622 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 BICDL2A1A5D9 508 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 FAM47DPA6NHR8 397 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 E9PAM4 449 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 TAF4O00268 1085 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 VILLO15195 856 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 YKT6O15498 198 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 MED7O43513 233 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 GNA14O95837 355 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 APOEP02649 317 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 ATXN1LP0C7T5 689 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 CSKP41240 450 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 OXCT1P55809 520 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 GCNT1Q02742 428 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 SLC12A1Q13621 1099 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 COL9A2Q14055 689 aaPredicted RBP11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 FAM133BQ5BKY9 247 aaKnown RBP11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 BEND5Q7L4P6 421 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 UBR7Q8N806 425 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 OR2T34Q8NGX1 318 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 TFAP2BQ92481 460 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 FAM149B1Q96BN6 582 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 MED15Q96RN5 788 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 MIS12Q9H081 205 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 ST7Q9NRC1 585 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 DKK4Q9UBT3 224 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 TJP2Q9UDY2 1190 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 FTSJ1Q9UET6 329 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
UBE2D3-211ENST00000502404 EDDM13A0A1B0GTR0 161 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 A0A1W2PPC4 97 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 H0Y8X5 98 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 PIK3R2O00459 728 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 PAPSS1O43252 624 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 DKK1O94907 266 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 FGFR1OPO95684 399 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SLC2A3P11169 496 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 BRD2P25440 801 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SLC6A4P31645 630 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SLC8A1P32418 973 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 CTSKP43235 329 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SGSHP51688 502 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 PMS1P54277 932 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 GALCP54803 685 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 ECT2LQ008S8 904 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SULT2A1Q06520 285 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 MTA1Q13330 715 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 ACAP1Q15027 740 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 CST6Q15828 149 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 MS4A13Q5J8X5 152 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 FOXR2Q6PJQ5 311 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■□□□□ 8.1
UBE2D3-211ENST00000502404 DHX40Q8IX18 779 aaKnown RBP11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 ELOA2Q8IYF1 753 aaPredicted RBP11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 SPATA20Q8TB22 786 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 STK32AQ8WU08 396 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 BTN2A3PQ96KV6 586 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 FAM81BQ96LP2 452 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 ERVW-1Q9UQF0 538 aa11.51□□□□□ -0.57
UBE2D3-211ENST00000502404 DSPP15924 2871 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms