RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	TARSL2	A2RTX5	802 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	HACD1	B0YJ81	288 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	GPR37	O15354	613 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	TTI1	O43156	1089 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	MAP3K6	O95382	1288 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	FCAR	P24071	287 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	MAPKAPK2	P49137	400 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	CDH4	P55283	916 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	RPS24	P62847	133 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	MRPS25	P82663	173 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	PRKD1	Q15139	912 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	SLC45A4	Q5BKX6	768 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	RABGAP1L	Q5R372	815 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	TTC39B	Q5VTQ0	682 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	BZW1	Q7L1Q6	419 aa	Known RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	MAATS1	Q7Z4T9	603 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	CIR1	Q86X95	450 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	CCDC105	Q8IYK2	499 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	SMRP1	Q8NCR6	262 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	CCDC26	Q8TAB7	109 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	SUSD6	Q92537	303 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	UBXN4	Q92575	508 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	HDAC11	Q96DB2	347 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	LRRC3B	Q96PB8	259 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	EPC1	Q9H2F5	836 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	OBP2A	Q9NY56	170 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	HEY1	Q9Y5J3	304 aa		12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	12.48	□□□□□ -0.41
MATR3-231	ENST00000502394	CHD5	Q8TDI0	1954 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	KIF26A	Q9ULI4	1882 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	BRWD1	Q9NSI6	2320 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394		A0A1B0GVM2	712 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	CFAP69	A5D8W1	941 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	TCAF2	A6NFQ2	919 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	TRDMT1	O14717	391 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	SCAMP3	O14828	347 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	NCAM2	O15394	837 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	CLDN11	O75508	207 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	ECEL1	O95672	775 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	RHOXF2B	P0C7M4	288 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	VAV1	P15498	845 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	IGFBP4	P22692	258 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	IVD	P26440	423 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	MTHFR	P42898	656 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	NDST2	P52849	883 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GDF10	P55107	478 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	DR1	Q01658	176 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	LMNB2	Q03252	620 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	ZNF33A	Q06730	810 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	PPID	Q08752	370 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	PTK6	Q13882	451 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	PDK1	Q15118	436 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	FAM78A	Q5JUQ0	283 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	ATAT1	Q5SQI0	421 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	MPP7	Q5T2T1	576 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	DUPD1	Q68J44	220 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GET4	Q7L5D6	327 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	ZC3H18	Q86VM9	953 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GPR161	Q8N6U8	529 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	CELF5	Q8N6W0	485 aa	Known RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GLIS1	Q8NBF1	620 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	NETO2	Q8NC67	525 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GRK7	Q8WTQ7	553 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	RUBCN	Q92622	972 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	SMARCD2	Q92925	531 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	RIPOR3	Q96MK2	946 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	TSGA13	Q96PP4	275 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	MYADM	Q96S97	322 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GAS2L1	Q99501	681 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	RHOXF2	Q9BQY4	288 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	TRIM51	Q9BSJ1	452 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	TMEM121	Q9BTD3	319 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	SLC39A8	Q9C0K1	460 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	BRD8	Q9H0E9	1235 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	C10orf88	Q9H8K7	445 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	GDF3	Q9NR23	364 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	DONSON	Q9NYP3	566 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	CDH7	Q9ULB5	785 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	TBC1D30	Q9Y2I9	924 aa		12.47	□□□□□ -0.41
MATR3-231	ENST00000502394	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394		H7C0C1	242 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	TSPAN3	O60637	253 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	HEXIM1	O94992	359 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	MX2	P20592	715 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	RBL1	P28749	1068 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	STIP1	P31948	543 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	CHKA	P35790	457 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	GARS	P41250	739 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	ATP5O	P48047	213 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	YBEY	P58557	167 aa	Predicted RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	SLC7A5	Q01650	507 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	ELF2	Q15723	593 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	CXorf57	Q6NSI4	855 aa	Known RBP	12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	CES5A	Q6NT32	575 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	NUDT18	Q6ZVK8	323 aa		12.46	□□□□□ -0.41
MATR3-231	ENST00000502394	TFAP2D	Q7Z6R9	452 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms