RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	TRIM14	Q14142	442 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	NFKBIB	Q15653	356 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CDO1	Q16878	200 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CXorf57	Q6NSI4	855 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	TRNP1	Q6NT89	227 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	WDR59	Q6PJI9	974 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF783	Q6ZMS7	281 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CYP2U1	Q7Z449	544 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	C12orf50	Q8NA57	414 aa	Predicted RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	FAM172A	Q8WUF8	416 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	RLN3	Q8WXF3	142 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	FOXJ1	Q92949	421 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	NTAN1	Q96AB6	310 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	NCAPG	Q9BPX3	1015 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CNPY3	Q9BT09	278 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ZYG11B	Q9C0D3	744 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	MKRN2	Q9H000	416 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	OSBPL2	Q9H1P3	480 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ARRDC1-AS1	Q9H2J1	176 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	MRPL47	Q9HD33	250 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	SLC25A13	Q9UJS0	675 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	INTS6	Q9UL03	887 aa	Known RBP	10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	ERVW-1	Q9UQF0	538 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	INVS	Q9Y283	1065 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	CKAP5	Q14008	2032 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	RALGAPA1	Q6GYQ0	2036 aa		10.82	□□□□□ -0.68
FXR1-222	ENST00000498658	THADA	Q6YHU6	1953 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	IGHV1OR15-9	A0A0B4J2B8	117 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	EDDM13	A0A1B0GTR0	161 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	TCRBV5S1A1T	A0A578	114 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	FAM170A	A1A519	330 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	BCLAF3	A2AJT9	711 aa	Known RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	TMCO5B	A8MYB1	307 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	SRGAP2	O75044	1071 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	IGLV3-19	P01714	112 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	FTL	P02792	175 aa	Predicted RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	DNTT	P04053	509 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	RHOC	P08134	193 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	BCKDHB	P21953	392 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	TGM1	P22735	817 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	RRM1	P23921	792 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	OR1E1	P30953	314 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	DHPS	P49366	369 aa	Predicted RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	COPA	P53621	1224 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	ATXN1	P54253	815 aa	Known RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	HDAC4	P56524	1084 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	TTC31	Q49AM3	519 aa	Predicted RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	TDRD12	Q587J7	1177 aa	Known RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	PLA2G2C	Q5R387	149 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	SYCP2L	Q5T4T6	812 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	LYSMD4	Q5XG99	296 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF776	Q68DI1	518 aa	Predicted RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	SPECC1L	Q69YQ0	1117 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	PRR23C	Q6ZRP0	262 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	RABEPK	Q7Z6M1	372 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	SLFN11	Q7Z7L1	901 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	PHLDB2	Q86SQ0	1253 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	C14orf80	Q86SX3	495 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	DRC7	Q8IY82	874 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	ZNF683	Q8IZ20	524 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	APCDD1	Q8J025	514 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	CADM4	Q8NFZ8	388 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	JOSD2	Q8TAC2	188 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	MCEE	Q96PE7	176 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	FEM1A	Q9BSK4	669 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	ADAM33	Q9BZ11	813 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	XPO4	Q9C0E2	1151 aa	Known RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	MUC3B	Q9H195	1237 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	PCED1A	Q9H1Q7	454 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	PRSS16	Q9NQE7	514 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	ANLN	Q9NQW6	1124 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	DONSON	Q9NYP3	566 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	USP36	Q9P275	1121 aa	Known RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	OR12D3	Q9UGF7	316 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	MBD1	Q9UIS9	605 aa	Predicted RBP	10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	VPS28	Q9UK41	221 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	CYP8B1	Q9UNU6	501 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	SCIN	Q9Y6U3	715 aa		10.81	□□□□□ -0.68
FXR1-222	ENST00000498658	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	CXorf51A	A0A1B0GTR3	108 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	ILVBL	A1L0T0	632 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	EIF3CL	B5ME19	914 aa	Known RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	DDX3X	O00571	662 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	HLA-E	P13747	358 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	MZF1	P28698	734 aa	Predicted RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	TPMT	P51580	245 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	RPL7A	P62424	266 aa	Known RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	SCAP	Q12770	1279 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	MAMLD1	Q13495	774 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	ELAVL3	Q14576	367 aa	Known RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	TSR1	Q2NL82	804 aa	Known RBP	10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	EFHC2	Q5JST6	749 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	PPP1R15B	Q5SWA1	713 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	PLEKHA7	Q6IQ23	1121 aa		10.8	□□□□□ -0.68
FXR1-222	ENST00000498658	DSG4	Q86SJ6	1040 aa		10.8	□□□□□ -0.68

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