RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 ANKEF1Q9NU02 776 aa5.47□□□□□ -1.53
FXN-205ENST00000498653 HOOK1Q9UJC3 728 aaKnown RBP5.47□□□□□ -1.53
FXN-205ENST00000498653 AKAP6Q13023 2319 aa5.47□□□□□ -1.53
FXN-205ENST00000498653 A0A087WWV3 80 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 TMEM150BA6NC51 233 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 TBC1D3BA6NDS4 549 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 WASH3PC4AMC7 463 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 C9orf172C9J069 976 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 INAFM1C9JVW0 142 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 MKRN2OSH3BPM6 223 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 TRAPPC3O43617 180 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 KRT86O43790 486 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 FSBPO95073 299 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 LY6G6DO95868 133 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 INHBBP09529 407 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 PLA2G4BP0C869 781 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 NFKB1P19838 968 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 YWHABP31946 246 aaKnown RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 ETV5P41161 510 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 COPAP53621 1224 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 PER3P56645 1201 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 ADAM8P78325 824 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 AMPD3Q01432 767 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 ECM1Q16610 540 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 ZNF630Q2M218 657 aaPredicted RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 KLHL40Q2TBA0 621 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 DEFB109BQ30KR1 87 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 XKR9Q5GH70 373 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 RHBDF2Q6PJF5 856 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 CRTC1Q6UUV9 634 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 BNC2Q6ZN30 1099 aaPredicted RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 KRBA2Q6ZNG9 492 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 RAB11FIP2Q7L804 512 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 KCNK18Q7Z418 384 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 SRGAP1Q7Z6B7 1085 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 EXOC8Q8IYI6 725 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 ATAD1Q8NBU5 361 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 GPT2Q8TD30 523 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 LARP4BQ92615 738 aaKnown RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 SYAP1Q96A49 352 aaPredicted RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 CEP170P1Q96L14 293 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 APOLD1Q96LR9 279 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 CITED4Q96RK1 184 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 PLA2G12AQ9BZM1 189 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 CAAP1Q9H8G2 361 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 ERVMER34-1Q9H9K5 563 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 CHST11Q9NPF2 352 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 BLOC1S4Q9NUP1 217 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 UCKL1Q9NWZ5 548 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 LUZP4Q9P127 313 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 WRAP73Q9P2S5 460 aaPredicted RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 PISDQ9UG56 409 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 CROTQ9UKG9 612 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 PPME1Q9Y570 386 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 CITO14578 2027 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 TDRD6O60522 2096 aaKnown RBP5.46□□□□□ -1.54
FXN-205ENST00000498653 CACNA1CQ13936 2221 aa5.46□□□□□ -1.54
FXN-205ENST00000498653 RTN3O95197 1032 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 STBD1O95210 358 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 MAP3K6O95382 1288 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 NPTXRO95502 500 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 KRT18P05783 430 aaKnown RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 ADH5P11766 374 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 HMGA1P17096 107 aaKnown RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 ITIH1P19827 911 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 HTR1EP28566 365 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 AXLP30530 894 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 ADSLP30566 484 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 RARRES1P49788 294 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 NPEPPSP55786 919 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 EIF3IQ13347 325 aaKnown RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 MTERF2Q49AM1 385 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 CCDC183Q5T5S1 534 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 ATP1A1-AS1Q5TC04 95 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 TTC39BQ5VTQ0 682 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 CEP135Q66GS9 1140 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 PLA2G4FQ68DD2 849 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 CAVIN1Q6NZI2 390 aaKnown RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 GUSBP11Q6P575 273 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 ANO5Q75V66 913 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 ZNF438Q7Z4V0 828 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 FILIP1Q7Z7B0 1213 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 GPBP1Q86WP2 473 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 CDR2LQ86X02 465 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 ELOA2Q8IYF1 753 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 GRAMD1CQ8IYS0 662 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 HACE1Q8IYU2 909 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 OXR1Q8N573 874 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 SYT2Q8N9I0 419 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 ITLN2Q8WWU7 325 aaPredicted RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 NRGNQ92686 78 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 NKD1Q969G9 470 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 CCDC47Q96A33 483 aaKnown RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 SIPA1Q96FS4 1042 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 PAGE5Q96GU1 130 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 PPP1R10Q96QC0 940 aaKnown RBP5.45□□□□□ -1.54
FXN-205ENST00000498653 CYP2S1Q96SQ9 504 aa5.45□□□□□ -1.54
FXN-205ENST00000498653 JPH2Q9BR39 696 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms