RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 IRF1P10914 325 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TSHRP16473 764 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TUBP50607 506 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ATP1A2P50993 1020 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 EPHB3P54753 998 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 MAGOHP61326 146 aaKnown RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 PPP2R2AP63151 447 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 SARNPP82979 210 aaKnown RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 WASHC5Q12768 1159 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ZBTB17Q13105 803 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 EFTUD2Q15029 972 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 KLHL38Q2WGJ6 581 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 MSS51Q4VC12 460 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TMEM240Q5SV17 173 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 HECTD3Q5T447 861 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 C6orf118Q5T5N4 469 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TIGD7Q6NT04 549 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ZNF534Q76KX8 674 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TFAP2DQ7Z6R9 452 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ITIH5Q86UX2 942 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ARHGAP12Q8IWW6 846 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 GPR65Q8IYL9 337 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ZNF567Q8N184 647 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 MCUQ8NE86 351 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 MARVELD3Q96A59 401 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 PLD4Q96BZ4 506 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TLCD1Q96CP7 247 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 PGM2Q96G03 612 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 RPRD1AQ96P16 312 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ROPN1BQ9BZX4 212 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ZYG11BQ9C0D3 744 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 PPCSQ9HAB8 311 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ROPN1Q9HAT0 212 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 XAB2Q9HCS7 855 aaKnown RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 PRDM10Q9NQV6 1147 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ENTPD7Q9NQZ7 604 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 MPP6Q9NZW5 540 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 CXXC1Q9P0U4 656 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 IGSF9Q9P2J2 1179 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 CTNNAL1Q9UBT7 734 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 LGALS13Q9UHV8 139 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 DNMT3LQ9UJW3 386 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ADAM21Q9UKJ8 722 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 ZMYND8Q9ULU4 1186 aaPredicted RBP8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 TTLL3Q9Y4R7 772 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 INSL6Q9Y581 213 aa8.28□□□□□ -1.08
PDZRN3-212ENST00000498048 MYO7AQ13402 2215 aa8.27□□□□□ -1.08
PDZRN3-212ENST00000498048 WASH4PA8MWX3 477 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ALOX15BO15296 676 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TEX28O15482 410 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 COCHO43405 550 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TLL1O43897 1013 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 LRG1P02750 347 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 LINC00271P0C7V0 271 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 RHOQP17081 205 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 HMGA1P17096 107 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 SYN1P17600 705 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 NFKB1P19838 968 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TACR2P21452 398 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 STX2P32856 288 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ATP5C1P36542 298 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ELK3P41970 407 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 IRAK1P51617 712 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 IFI35P80217 286 aaPredicted RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 SKOR1P84550 965 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 CDK16Q00536 496 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF33AQ06730 810 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 AUHQ13825 339 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TERF2Q15554 542 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ANO4Q32M45 955 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ACBD5Q5T8D3 534 aaPredicted RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 SNX30Q5VWJ9 437 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 PLPP4Q5VZY2 271 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 KLHDC10Q6PID8 442 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 C16orf59Q7L2K0 433 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TAOK1Q7L7X3 1001 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 C14orf80Q86SX3 495 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 NLRP14Q86W24 1093 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 CIR1Q86X95 450 aaPredicted RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ZNF354CQ86Y25 554 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 HERC6Q8IVU3 1022 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TCEAL8Q8IYN2 117 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 KLHL23Q8NBE8 558 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 USP33Q8TEY7 942 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 CLP1Q92989 425 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 ZDHHC16Q969W1 377 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 LRRC39Q96DD0 335 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 C1orf74Q96LT6 269 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 MYRFLQ96LU7 910 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 GCNAQ96QF7 691 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 VAT1Q99536 393 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 SP110Q9HB58 689 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TRPC7Q9HCX4 862 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TMEM248Q9NWD8 314 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 DONSONQ9NYP3 566 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 PSMC3IPQ9P2W1 217 aaPredicted RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 PPARGC1AQ9UBK2 798 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 TRHDEQ9UKU6 1024 aa8.27□□□□□ -1.09
PDZRN3-212ENST00000498048 MAFFQ9ULX9 164 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms