RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 IRF1P10914 325 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 RHOQP17081 205 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 ERVFC1P60507 584 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 TERF2Q15554 542 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 PLPP4Q5VZY2 271 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 AFMIDQ63HM1 303 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 KLHDC10Q6PID8 442 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 SPRED2Q7Z698 418 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 TMEM150AQ86TG1 271 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 PALM2Q8IXS6 379 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 DPF3Q92784 378 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 GORASP1Q9BQQ3 440 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 CCDC77Q9BR77 488 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 RNF38Q9H0F5 515 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 TRPC7Q9HCX4 862 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 PIH1D1Q9NWS0 290 aaKnown RBP18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 IGSF9Q9P2J2 1179 aa18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 UXTQ9UBK9 157 aaPredicted RBP18.23■□□□□ 0.51
CHRNA4-206ENST00000498043 OAS1P00973 400 aaKnown RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 JCHAINP01591 159 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 ADH1AP07327 375 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 TACR2P21452 398 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 IFI35P80217 286 aaPredicted RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 EFTUD2Q15029 972 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 CFAP36Q96G28 342 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 GBA3Q9H227 469 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 NOL6Q9H6R4 1146 aaKnown RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 GKN1Q9NS71 199 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 TMEM248Q9NWD8 314 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 TBK1Q9UHD2 729 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 TTLL3Q9Y4R7 772 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 HIDE1A8MVS5 230 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 MAFKO60675 156 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 NFKB1P19838 968 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 SLC6A4P31645 630 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 CD68P34810 354 aaPredicted RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 PHBP35232 272 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 BMPR1AP36894 532 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 MAGEA3P43357 314 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 HARS2P49590 506 aaKnown RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 PAPOLAP51003 745 aaKnown RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 TEX44Q53QW1 395 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 RFWD3Q6PCD5 774 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 KDM7AQ6ZMT4 941 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 C3orf62Q6ZUJ4 267 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 ITIH5Q86UX2 942 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 DENND1CQ8IV53 801 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 LGI2Q8N0V4 545 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 PHOSPHO2Q8TCD6 241 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF419Q96HQ0 510 aaPredicted RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 KLHL5Q96PQ7 755 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 C17orf80Q9BSJ5 609 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 EIF2B3Q9NR50 452 aaKnown RBP18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 SMPD4Q9NXE4 827 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 MAFFQ9ULX9 164 aa18.22■□□□□ 0.51
CHRNA4-206ENST00000498043 F5H5T6 163 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 POC1B-GALNT4F8VUJ3 575 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 TCEA3O75764 348 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 PIAS1O75925 651 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 STC2O76061 302 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 CCNB1P14635 433 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 CCNCP24863 283 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 DNAJB1P25685 340 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 ZNF33AQ06730 810 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 OLIG2Q13516 323 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 SPARCL1Q14515 664 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 FAM133BQ5BKY9 247 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 CFAP52Q8N1V2 620 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 UMODL1-AS1Q8N2C9 162 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 ZSCAN18Q8TBC5 510 aaPredicted RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 PLD4Q96BZ4 506 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 TSGA13Q96PP4 275 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 VAT1Q99536 393 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 LBHD1Q9BQE6 289 aaPredicted RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 XAB2Q9HCS7 855 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 TRHDEQ9UKU6 1024 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 LINC01553A4QN01 128 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 ARHGAP42A6NI28 874 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 ACSL4O60488 711 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 ARHGEF15O94989 841 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 CPP00450 1065 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 AGTP01019 485 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 LRG1P02750 347 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 C8AP07357 584 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 MYOGP15173 224 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 CORO1AP31146 461 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 PPP3CCP48454 512 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 SARNPP82979 210 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 ITPRIPL1Q6GPH6 555 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 MPP5Q8N3R9 675 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 FBF1Q8TES7 1133 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 MRRFQ96E11 262 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 HMCESQ96FZ2 354 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 TEKT5Q96M29 485 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 MTIF3Q9H2K0 278 aaKnown RBP18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 IL21Q9HBE4 155 aa18.21■□□□□ 0.51
CHRNA4-206ENST00000498043 F11P03951 625 aa18.2■□□□□ 0.5
CHRNA4-206ENST00000498043 KLKB1P03952 638 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms