RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 MRGPRX3Q96LB0 322 aa16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 SIK2Q9H0K1 926 aa16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 SEPT11Q9NVA2 429 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 ARHGAP20Q9P2F6 1191 aa16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 VANGL2Q9ULK5 521 aa16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 SNX10Q9Y5X0 201 aa16.46■□□□□ 0.23
CTDSP1-214ENST00000497677 SIGLEC16A6NMB1 481 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 DRGXA6NNA5 263 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 RHOBTB1O94844 696 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 EPHX1P07099 455 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 KRT3P12035 628 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 RDXP35241 583 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 EIF4A3P38919 411 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 CTSOP43234 321 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 PTPN9P43378 593 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 PLK1P53350 603 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 ATP11AP98196 1134 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 STARD3Q14849 445 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 ELF2Q15723 593 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 C15orf59Q2T9L4 293 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 PLEKHG6Q3KR16 790 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 RABGAP1LQ5R372 815 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 PLA2G2CQ5R387 149 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 TTC39BQ5VTQ0 682 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 HGSNATQ68CP4 663 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 METTL3Q86U44 580 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 FAM131BQ86XD5 332 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 GPR161Q8N6U8 529 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 RPRD1AQ96P16 312 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 HAPLN3Q96S86 360 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 ARRDC1-AS1Q9H2J1 176 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 CD93Q9NPY3 652 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 SEMA4GQ9NTN9 838 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 MYO1AQ9UBC5 1043 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 OR51B4Q9Y5P0 310 aa16.45■□□□□ 0.22
CTDSP1-214ENST00000497677 IGLV3-10A0A075B6K4 115 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 IGHV1OR15-9A0A0B4J2B8 117 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 DDX3XO00571 662 aaKnown RBP eCLIP16.44■□□□□ 0.223e-13■■■□□ 17.9
CTDSP1-214ENST00000497677 SYNCRIPO60506 623 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 CNTN5O94779 1100 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 ASLP04424 464 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 MZF1P28698 734 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 BYSLQ13895 437 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 CSRP2Q16527 193 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 ASTE1Q2TB18 679 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 FNDC3BQ53EP0 1204 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 ALFQ53S48 1182 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 STRADAQ7RTN6 431 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 KIAA1328Q86T90 577 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 TMPRSS6Q8IU80 811 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 CCDC117Q8IWD4 279 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 ZNF366Q8N895 744 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 PRSS16Q9NQE7 514 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 USP36Q9P275 1121 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 TBC1D30Q9Y2I9 924 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 PCDHGA5Q9Y5G8 931 aa16.44■□□□□ 0.22
CTDSP1-214ENST00000497677 BCLAF3A2AJT9 711 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 USP27XA6NNY8 438 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ZBTB24O43167 697 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 KRT86O43790 486 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 KIF5CO60282 957 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ZNF217O75362 1048 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 CLDN11O75508 207 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 TNNT1P13805 278 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 RRM1P23921 792 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 SDC4P31431 198 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ADRA1BP35368 520 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 CDH4P55283 916 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 HDAC4P56524 1084 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 RPL7AP62424 266 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 SLC12A1Q13621 1099 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 SLC18A3Q16572 532 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ACBD5Q5T8D3 534 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 DNAAF5Q86Y56 855 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 KDM1BQ8NB78 822 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 OR2T3Q8NH03 318 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 SPACA7Q96KW9 195 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 C16orf45Q96MC5 204 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 FEM1AQ9BSK4 669 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 DESI2Q9BSY9 194 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 SELENOOQ9BVL4 669 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 MTG2Q9H4K7 406 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 PRDM16Q9HAZ2 1276 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ITM2CQ9NQX7 267 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ZNF212Q9UDV6 495 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ERVW-1Q9UQF0 538 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ABCA7Q8IZY2 2146 aa16.43■□□□□ 0.22
CTDSP1-214ENST00000497677 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.42■□□□□ 0.22
CTDSP1-214ENST00000497677 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.42■□□□□ 0.22
CTDSP1-214ENST00000497677 SRPRAP08240 638 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-214ENST00000497677 ZNF806P0C7X5 589 aa16.42■□□□□ 0.22
CTDSP1-214ENST00000497677 GZMAP12544 262 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms