RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PLCL1Q15111 1095 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 NAPRTQ6XQN6 538 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 BTLAQ7Z6A9 289 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 DLG3Q92796 817 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 FBXL20Q96IG2 436 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 ZBTB45Q96K62 511 aaPredicted RBP13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 PLAC1Q9HBJ0 212 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 KCNH7Q9NS40 1196 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 PAK5Q9P286 719 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 AP4E1Q9UPM8 1137 aa13.35□□□□□ -0.27
GAPVD1-220ENST00000497580 SMCHD1A6NHR9 2005 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 PLIN4Q96Q06 1357 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 SOCS2O14508 198 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 FAM189A1O60320 539 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 BCAS2O75934 225 aaPredicted RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CYP2C9P11712 490 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CRKP46108 304 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 SERPINB9P50453 376 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 TXNL4AP83876 142 aaKnown RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 INAQ16352 499 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ZBTB41Q5SVQ8 909 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 SH3PXD2AQ5TCZ1 1133 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CBR4Q8N4T8 237 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ARFGAP1Q8N6T3 406 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CLIP3Q96DZ5 547 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 MFSD14AQ96MC6 490 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 EFCAB1Q9HAE3 211 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 PRDM16Q9HAZ2 1276 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ZNFX1Q9P2E3 1918 aaKnown RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 KCNU1A8MYU2 1149 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 PSMD11O00231 422 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 PRKCHP24723 683 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ANKRD26P1Q6NSI1 321 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 KCTD8Q6ZWB6 473 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 SIX5Q8N196 739 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CHPT1Q8WUD6 406 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 LPGAT1Q92604 370 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 DHX33Q9H6R0 707 aaKnown RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 NCKIPSDQ9NZQ3 722 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ATP11BQ9Y2G3 1177 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CHADO15335 359 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 MT-CO1P00395 513 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 C1QAP02745 245 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 GLRBP48167 497 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 DLG2Q15700 870 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 IGFN1Q86VF2 1251 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 MAP4K3Q8IVH8 894 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 PGAM4Q8N0Y7 254 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CDKL2Q92772 493 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CEP170P1Q96L14 293 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ZNF597Q96LX8 424 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 ACO2Q99798 780 aaKnown RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CEP41Q9BYV8 373 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 GBA3Q9H227 469 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 MRPL46Q9H2W6 279 aaKnown RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 CAB39LQ9H9S4 337 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 IL1RL2Q9HB29 575 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 KIAA1522Q9P206 1035 aaPredicted RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 GMPR2Q9P2T1 348 aaKnown RBP13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 HESX1Q9UBX0 185 aa13.34□□□□□ -0.27
GAPVD1-220ENST00000497580 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ZNF195O14628 629 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 RAD17O75943 681 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 VNN1O95497 513 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ERVK-10P10266 1014 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ITGB5P18084 799 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 BCAR1P56945 870 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ADAM17P78536 824 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 DEPDC1Q5TB30 811 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 EPGNQ6UW88 154 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 POLE4Q9NR33 117 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 NXF1Q9UBU9 619 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 AHDC1Q5TGY3 1603 aaPredicted RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CCDC78A2IDD5 438 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ZBBXA8MT70 800 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 KPNA4O00629 521 aaPredicted RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 TRDMT1O14717 391 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ZBTB7AO95365 584 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 BMP10O95393 424 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 GSSP48637 474 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 TUBA4AP68366 448 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 ZACNQ401N2 412 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 PRR23BQ6ZRT6 265 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 THNSL1Q8IYQ7 743 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 KIAA2013Q8IYS2 634 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 PLD6Q8N2A8 252 aaKnown RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CCNYL1Q8N7R7 359 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 SCYL1Q96KG9 808 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 PALMDQ9NP74 551 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 SMOXQ9NWM0 555 aa13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 CTDP1Q9Y5B0 961 aaPredicted RBP13.33□□□□□ -0.28
GAPVD1-220ENST00000497580 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms