RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 CALCOCO1Q9P1Z2 691 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 OR12D3Q9UGF7 316 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 VPS28Q9UK41 221 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 HS3ST4Q9Y661 456 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 ZNF292O60281 2723 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 DMDP11532 3685 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 ATG2BQ96BY7 2078 aa7.82□□□□□ -1.16
CDHR3-214ENST00000496633 OTOGLQ3ZCN5 2332 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 GOLGA6L7A0A1B0GV03 622 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 SSU72P8A0A1W2PR75 194 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 E9PAM4 449 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 C1QTNF3-AMACRE9PGA6 284 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 KHNYNO15037 678 aaKnown RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 TRIM24O15164 1050 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ADCY5O95622 1261 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ADH1BP00325 375 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 FTLP02792 175 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ZNF806P0C7X5 589 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 RHOQP17081 205 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 NDUFV2P19404 249 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 CD6P30203 668 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 CD70P32970 193 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 RFC1P35251 1148 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 RECQLP46063 649 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PXNP49023 591 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 LIMK1P53667 647 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 YBEYP58557 167 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ATP11AP98196 1134 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 RPL6Q02878 288 aaKnown RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 MESP2Q0VG99 397 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PTP4A2Q12974 167 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PIGHQ14442 188 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PUM1Q14671 1186 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 CCDC14Q49A88 953 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 LYSMD4Q5XG99 296 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ZNF776Q68DI1 518 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PLEKHA7Q6IQ23 1121 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 WDR59Q6PJI9 974 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 SARM1Q6SZW1 724 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 KIAA1324Q6UXG2 1013 aaKnown RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 CYP2U1Q7Z449 544 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ZSCAN30Q86W11 494 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 SYT12Q8IV01 421 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 CFAP52Q8N1V2 620 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 DCAF4L2Q8NA75 395 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 FAM172AQ8WUF8 416 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 SKA1Q96BD8 255 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 TBC1D31Q96DN5 1066 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 MCEEQ96PE7 176 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PCDHB18PQ96TA0 734 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PHOX2BQ99453 314 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 FEM1AQ9BSK4 669 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 SYT11Q9BT88 431 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 NUSAP1Q9BXS6 441 aaKnown RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 TPSD1Q9BZJ3 242 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ZDHHC5Q9C0B5 715 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 XPO4Q9C0E2 1151 aaKnown RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 CEP44Q9C0F1 390 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 MAGEH1Q9H213 219 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 SGK2Q9HBY8 427 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PLSCR2Q9NRY7 297 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 HAUS2Q9NVX0 235 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 USP36Q9P275 1121 aaKnown RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 EVLQ9UI08 416 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 FZD4Q9ULV1 537 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 USP18Q9UMW8 372 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 ERVW-1Q9UQF0 538 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 HS3ST2Q9Y278 367 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 PLXND1Q9Y4D7 1925 aa7.81□□□□□ -1.16
CDHR3-214ENST00000496633 EP300Q09472 2414 aaPredicted RBP7.81□□□□□ -1.16
CDHR3-214ENST00000496633 GVINP1Q7Z2Y8 2422 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 FRYLO94915 3013 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 WDR87Q6ZQQ6 2873 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 BCLAF3A2AJT9 711 aaKnown RBP7.8□□□□□ -1.16
CDHR3-214ENST00000496633 SLC7A4O43246 635 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 ATP9BO43861 1147 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PRPSAP2O60256 369 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 SRGAP2O75044 1071 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 SYPP08247 313 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PLEKP08567 350 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-214ENST00000496633 C5AR1P21730 350 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PSMA2P25787 234 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PCK1P35558 622 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 MPLP40238 635 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 WASP42768 502 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PITX1P78337 314 aaPredicted RBP7.8□□□□□ -1.16
CDHR3-214ENST00000496633 CREB5Q02930 508 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 DMWDQ09019 674 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 MAMLD1Q13495 774 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 HADHQ16836 314 aaKnown RBP7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PTPRNQ16849 979 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 CDO1Q16878 200 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 DUOXA1Q1HG43 343 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 BOLA3Q53S33 107 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 PPP1R15BQ5SWA1 713 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 TMEM215Q68D42 235 aa7.8□□□□□ -1.16
CDHR3-214ENST00000496633 CXorf57Q6NSI4 855 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms