RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 BTN2A1Q7KYR7 527 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 RTN4RL1Q86UN2 441 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC25Q86WR0 208 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 LZICQ8WZA0 190 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 ARL8AQ96BM9 186 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 ZIM3Q96PE6 472 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PEBP4Q96S96 227 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 OSBPL8Q9BZF1 889 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 NDEL1Q9GZM8 345 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 NGRNQ9NPE2 291 aaKnown RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 WDR35Q9P2L0 1181 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 ATPIF1Q9UII2 106 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 TTC7AQ9ULT0 858 aaPredicted RBP6.35□□□□□ -1.39
SSBP1-213ENST00000496622 ZNF711Q9Y462 761 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 TRPV2Q9Y5S1 764 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 PTCH2Q9Y6C5 1203 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 REV3LO60673 3130 aa6.35□□□□□ -1.39
SSBP1-213ENST00000496622 KRBA1A5PL33 1030 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 A6NHS1 94 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 EBAG9O00559 213 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CES2O00748 559 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TP73O15350 636 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 KRT1P04264 644 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CALB1P05937 261 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 THP07101 528 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PAEPP09466 180 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 GSTT2P0CG29 244 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 GSTT2BP0CG30 244 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PDGFRAP16234 1089 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 MIPP30301 263 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CDH5P33151 784 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 EVI2BP34910 448 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 COILP38432 576 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PCBP4P57723 403 aaKnown RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PLCB3Q01970 1234 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 UAP1Q16222 522 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 ACCSLQ4AC99 568 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 METTL11BQ5VVY1 283 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CORO6Q6QEF8 472 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 ZNF280BQ86YH2 543 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 RHOT1Q8IXI2 618 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 ADGRF2Q8IZF7 708 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 SVOPQ8N4V2 548 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 SLC35F5Q8WV83 523 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 RXFP2Q8WXD0 754 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 B3GALT6Q96L58 329 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 GLT1D1Q96MS3 346 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PPP1R10Q96QC0 940 aaKnown RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 SERINC2Q96SA4 455 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TMEM209Q96SK2 561 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 ERP44Q9BS26 406 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TMEM121Q9BTD3 319 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CALN1Q9BXU9 219 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 FOXP3Q9BZS1 431 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 DNPEPQ9ULA0 475 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 UTP11Q9Y3A2 253 aaKnown RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 HEY1Q9Y5J3 304 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 DNAH14Q0VDD8 3507 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 SMIM23A6NLE4 172 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 SIGLEC16A6NMB1 481 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 FOXO6A8MYZ6 492 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC188H7C350 402 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 RTCAO00442 366 aaKnown RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 MED7O43513 233 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 HUS1O60921 280 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TMCC2O75069 709 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PHF2O75151 1096 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 LSM8O95777 96 aaKnown RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 RECKO95980 971 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 IFNB1P01574 187 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 HMGCRP04035 888 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CDK4P11802 303 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CKBP12277 381 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CTNNA2P26232 953 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 MTHFRP42898 656 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 NUMBP49757 651 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TAF6P49848 677 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 GATMP50440 423 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 EPHB4P54760 987 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TUBB4BP68371 445 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CDC42EP1Q00587 391 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 MGAT3Q09327 533 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 IFRD2Q12894 506 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 KLF1Q13351 362 aaPredicted RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TUBA3CQ13748 450 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PPP1R7Q15435 360 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 CA9Q16790 459 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 P3H1Q32P28 736 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 TIGD5Q53EQ6 642 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 SLC44A4Q53GD3 710 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 GLE1Q53GS7 698 aaKnown RBP6.34□□□□□ -1.39
SSBP1-213ENST00000496622 C6orf183Q5T699 404 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 LCLAT1Q6UWP7 414 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 PAQR9Q6ZVX9 377 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 RNF180Q86T96 592 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 FUKQ8N0W3 1084 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 ZSCAN1Q8NBB4 408 aa6.34□□□□□ -1.39
SSBP1-213ENST00000496622 UBLCP1Q8WVY7 318 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms