RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 PPIL2Q13356 520 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 COG2Q14746 738 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 BTBD8Q5XKL5 378 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CTRB2Q6GPI1 263 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF790Q6PG37 636 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF34Q8IZ26 560 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SDR42E1Q8WUS8 393 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CIDECQ96AQ7 238 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF496Q96IT1 587 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SCYL1Q96KG9 808 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 TBATAQ96M53 351 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 NT5C1BQ96P26 610 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CNPY3Q9BT09 278 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 MECRQ9BV79 373 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 DHX33Q9H6R0 707 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC35C2Q9NQQ7 365 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 AAASQ9NRG9 546 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ZC3H7BQ9UGR2 993 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 TRAF6Q9Y4K3 522 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 LOC105371267A0A1B0GV96 52 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SLC22A1O15245 554 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 RGS20O76081 388 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CD4P01730 458 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PSKH1P11801 424 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CFL1P23528 166 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 DCKP27707 260 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 POLR2BP30876 1174 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 MSX2P35548 267 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 GRK3P35626 688 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ABCG1P45844 678 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF135P52742 658 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SELENBP1Q13228 472 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 GK3PQ14409 553 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ZNF267Q14586 743 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PUM3Q15397 648 aaKnown RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 WDR44Q5JSH3 913 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 LLGL2Q6P1M3 1020 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 XKRXQ6PP77 449 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 CYP2R1Q6VVX0 501 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 EEPD1Q7L9B9 569 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 RELL1Q8IUW5 271 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 DSELQ8IZU8 1212 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PGAM4Q8N0Y7 254 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SYTL5Q8TDW5 730 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 SH3YL1Q96HL8 342 aaPredicted RBP8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PCDH9Q9HC56 1237 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 FANCFQ9NPI8 374 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 POLE4Q9NR33 117 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 HOXC10Q9NYD6 342 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 ALKQ9UM73 1620 aa8.34□□□□□ -1.07
CRNKL1-205ENST00000496549 PIK3R2O00459 728 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 PLD2O14939 933 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 TSHRP16473 764 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 TFE3P19532 575 aaPredicted RBP8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 PSMB9P28065 219 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 SOX6P35712 828 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 ATP5OP48047 213 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 GTF2IP78347 998 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC18A2Q05940 514 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 CD300CQ08708 224 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC12A1Q13621 1099 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 SPCS2Q15005 226 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 RUNDC3AQ59EK9 446 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 PARP8Q8N3A8 854 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 LARGE2Q8N3Y3 721 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 PACRGLQ8N7B6 248 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 LRTOMTQ8WZ04 291 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC39A13Q96H72 371 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 PPP1R36Q96LQ0 422 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 CRAMP1Q96RY5 1269 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 BBS2Q9BXC9 721 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 HOXD1Q9GZZ0 328 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 HPS4Q9NQG7 708 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 POLR3BQ9NW08 1133 aaPredicted RBP8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 ING3Q9NXR8 418 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 TMEM5Q9Y2B1 443 aa8.34□□□□□ -1.08
CRNKL1-205ENST00000496549 TMEM191CA6NGB0 347 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CAPN14A8MX76 684 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 PDE9AO76083 593 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 TYK2P29597 1187 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 LSM3P62310 102 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MTM1Q13496 603 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 SCARF1Q14162 830 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 GRIK5Q16478 980 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MGAT5BQ3V5L5 792 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 MROH9Q5TGP6 573 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 METTL2BQ6P1Q9 378 aaKnown RBP8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 BTN2A1Q7KYR7 527 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 AMIGO1Q86WK6 493 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 FAM178BQ8IXR5 827 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 CCDC185Q8N715 623 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 OR8H1Q8NGG4 311 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 ZHX1-C8orf76Q96EF9 292 aa8.33□□□□□ -1.08
CRNKL1-205ENST00000496549 TM9SF2Q99805 663 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms