RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ZDHHC5Q9C0B5 715 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 IL21RQ9HBE5 538 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 SGK2Q9HBY8 427 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 SLC12A6Q9UHW9 1150 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 VANGL2Q9ULK5 521 aa14.72□□□□□ -0.05
VTI1A-209ENST00000496445 A0A1W2PP55 124 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 TARSL2A2RTX5 802 aaKnown RBP14.71□□□□□ -0.05
VTI1A-209ENST00000496445 C10orf142B7Z368 130 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 M0QYT0 321 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 PAGE1O75459 146 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 ADCY5O95622 1261 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 IGHV4-34P06331 123 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 VAV1P15498 845 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 SCNN1AP37088 669 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 SULT1E1P49888 294 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 PLK1P53350 603 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 SNX16P57768 344 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 SLC14A1Q13336 389 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 KRT31Q15323 416 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 C5orf22Q49AR2 442 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 FAM102AQ5T9C2 384 aaPredicted RBP14.71□□□□□ -0.05
VTI1A-209ENST00000496445 TRNP1Q6NT89 227 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 USP30Q70CQ3 517 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 MMAAQ8IVH4 418 aaKnown RBP14.71□□□□□ -0.05
VTI1A-209ENST00000496445 EPS8L1Q8TE68 723 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 NT5C3BQ969T7 300 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 BIRC7Q96CA5 298 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 ALG14Q96F25 216 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 FAM129BQ96TA1 746 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 STK33Q9BYT3 514 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 ARHGEF38Q9NXL2 777 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.71□□□□□ -0.05
VTI1A-209ENST00000496445 FNDC3AQ9Y2H6 1198 aaKnown RBP14.71□□□□□ -0.05
VTI1A-209ENST00000496445 SNX10Q9Y5X0 201 aa14.71□□□□□ -0.05
VTI1A-209ENST00000496445 KNL1Q8NG31 2342 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 DMXL2Q8TDJ6 3036 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 A0A1B0GVT2 93 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 EPHB6O15197 1021 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 SH3BP5O60239 455 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 FSBPO95073 299 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 MMEP08473 750 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 FLT3P36888 993 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 PSMD8P48556 350 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 CSNK1EP49674 416 aaKnown RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 CXCR3P49682 368 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 JAM2P57087 298 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 RNASE9P60153 205 aaKnown RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 NOMO3P69849 1222 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 SIM1P81133 766 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 ST3GAL2Q16842 350 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 ARTNQ5T4W7 220 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 RNF219Q5W0B1 726 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 LAYNQ6UX15 382 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 BNIPLQ7Z465 357 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 NAXDQ8IW45 347 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 ZNF683Q8IZ20 524 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 STK40Q8N2I9 435 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 AADATQ8N5Z0 425 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 FRS2Q8WU20 508 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 SLC20A1Q8WUM9 679 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 C18orf8Q96DM3 657 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 PGAP3Q96FM1 320 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 TBCBQ99426 244 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 TMEM121BQ9BXQ6 578 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 TKTL2Q9H0I9 626 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 VPS16Q9H269 839 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 PDCL3Q9H2J4 239 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 TM9SF3Q9HD45 589 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 OSGEPQ9NPF4 335 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 TMPRSS4Q9NRS4 437 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 FBXL12Q9NXK8 326 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 RRN3Q9NYV6 651 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 ADAMTS1Q9UHI8 967 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 NOCTQ9UK39 431 aaKnown RBP14.7□□□□□ -0.06
VTI1A-209ENST00000496445 SCML1Q9UN30 329 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 OR51B4Q9Y5P0 310 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 CHD6Q8TD26 2715 aa14.7□□□□□ -0.06
VTI1A-209ENST00000496445 CELSR3Q9NYQ7 3312 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 RNASEH1O60930 286 aaKnown RBP14.69□□□□□ -0.06
VTI1A-209ENST00000496445 CNTN5O94779 1100 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 LSM8O95777 96 aaKnown RBP14.69□□□□□ -0.06
VTI1A-209ENST00000496445 CER1O95813 267 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 CD27P26842 260 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 AFF3P51826 1226 aaKnown RBP14.69□□□□□ -0.06
VTI1A-209ENST00000496445 METAP1P53582 386 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 SULT2A1Q06520 285 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 ELAVL3Q14576 367 aaKnown RBP14.69□□□□□ -0.06
VTI1A-209ENST00000496445 KIF19Q2TAC6 998 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 HLA-BQ31612 363 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 ALFQ53S48 1182 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 BRMS1LQ5PSV4 323 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 ERICH1Q86X53 443 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 CPA5Q8WXQ8 436 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 FEM1AQ9BSK4 669 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 SCNM1Q9BWG6 230 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 SIK2Q9H0K1 926 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 NEUROG2Q9H2A3 272 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 GAREM1Q9H706 876 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 EBF2Q9HAK2 575 aa14.69□□□□□ -0.06
VTI1A-209ENST00000496445 TMEM59LQ9UK28 342 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms