RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 A0A1B0GTW7 788 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 METTL12A8MUP2 240 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 UPK3BL1B0FP48 263 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 UPK3BL2E5RIL1 263 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 ARHGAP33O14559 1287 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 SIN3BO75182 1162 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 SEMA4FO95754 770 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 TFE3P19532 575 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 NNMTP40261 264 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 CTSOP43234 321 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 CDH4P55283 916 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 GSCP56915 257 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 RNASE9P60153 205 aaKnown RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 UBXN1Q04323 297 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 ZNF177Q13360 481 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 C9orf64Q5T6V5 341 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 DCAF12L1Q5VU92 463 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 PSAPL1Q6NUJ1 521 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 APTXQ7Z2E3 356 aaKnown RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 BNIPLQ7Z465 357 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 FAM124AQ86V42 546 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 APCDD1Q8J025 514 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 HDDC3Q8N4P3 179 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 ZCCHC9Q8N567 271 aaKnown RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 AOPEPQ8N6M6 819 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 IGSF8Q969P0 613 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 PCMTD1Q96MG8 357 aaPredicted RBP16.19■□□□□ 0.18
HDAC4-213ENST00000496347 TBCBQ99426 244 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 BTBD1Q9H0C5 482 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 TMEM63CQ9P1W3 806 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 TBC1D30Q9Y2I9 924 aa16.19■□□□□ 0.18
HDAC4-213ENST00000496347 GOLGA8SH3BPF8 625 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 BCAT2O15382 392 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 ADCY5O95622 1261 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 CEACAM1P13688 526 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 CDK11BP21127 795 aaKnown RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 GGCXP38435 758 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 IRAK1P51617 712 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 CST6Q15828 149 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 UAP1L1Q3KQV9 507 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 C2CD6Q53TS8 623 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 SH3PXD2AQ5TCZ1 1133 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 LRSAM1Q6UWE0 723 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 DHX40Q8IX18 779 aaKnown RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 ZNF683Q8IZ20 524 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 MINDY1Q8N5J2 469 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 C1orf74Q96LT6 269 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 GTPBP2Q9BX10 602 aaKnown RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 METTL5Q9NRN9 209 aaKnown RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 DNAAF2Q9NVR5 837 aaKnown RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 SLC25A13Q9UJS0 675 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 VPS28Q9UK41 221 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 FZD4Q9ULV1 537 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.18■□□□□ 0.18
HDAC4-213ENST00000496347 CABIN1Q9Y6J0 2220 aa16.18■□□□□ 0.18
HDAC4-213ENST00000496347 FRYQ5TBA9 3013 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 CACNA1BQ00975 2339 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 CHD5Q8TDI0 1954 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 IGLV3-10A0A075B6K4 115 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 TTC34A8MYJ7 566 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 I6L893 689 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-213ENST00000496347 OPHN1O60890 802 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 ADH1BP00325 375 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 CHRNB2P17787 502 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 MZF1P28698 734 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-213ENST00000496347 ACSL1P33121 698 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 NSFP46459 744 aaKnown RBP16.17■□□□□ 0.18
HDAC4-213ENST00000496347 STK19P49842 368 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-213ENST00000496347 GRIK2Q13002 908 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 ANO6Q4KMQ2 910 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 TRNP1Q6NT89 227 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 LRRC31Q6UY01 552 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 SETD3Q86TU7 594 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-213ENST00000496347 CFAP57Q96MR6 1250 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 HAPLN3Q96S86 360 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 C11orf70Q9BRQ4 267 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 FEM1AQ9BSK4 669 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 SIK2Q9H0K1 926 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 MTG2Q9H4K7 406 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 C6orf106Q9H6K1 298 aaPredicted RBP16.17■□□□□ 0.18
HDAC4-213ENST00000496347 FSCN3Q9NQT6 498 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 ANLNQ9NQW6 1124 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 NCKAP1Q9Y2A7 1128 aa16.17■□□□□ 0.18
HDAC4-213ENST00000496347 CCDC172P0C7W6 258 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 UNGP13051 313 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-213ENST00000496347 ATP1A3P13637 1013 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 PMLP29590 882 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SDC4P31431 198 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 AFF3P51826 1226 aaKnown RBP16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SHC2P98077 582 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SEMA3BQ13214 749 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SLC14A1Q13336 389 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 C6orf118Q5T5N4 469 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 IL27RAQ6UWB1 636 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 DSG4Q86SJ6 1040 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 C14orf80Q86SX3 495 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
HDAC4-213ENST00000496347 DCAF4L2Q8NA75 395 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 C1orf216Q8TAB5 229 aa16.16■□□□□ 0.18
HDAC4-213ENST00000496347 SNX19Q92543 992 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms