RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 M0QZQ0 153 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 USP12O75317 370 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 AMHP03971 560 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 BRCC3P46736 316 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 SERPINB8P50452 374 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 AQP5P55064 265 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 FCGRTP55899 365 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 IRX4P78413 519 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 SREBF2Q12772 1141 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 ZBTB17Q13105 803 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 CRHR2Q13324 411 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 TUSC3Q13454 348 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 TBCCQ15814 346 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 CCDC153Q494R4 210 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 PAN2Q504Q3 1202 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 OVOS1Q6IE37 1185 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 CES3Q6UWW8 571 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 LINC00523Q86TU6 105 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 ARHGAP24Q8N264 748 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 PIWIL2Q8TC59 973 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 DQX1Q8TE96 717 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 PPP4R1Q8TF05 950 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 MCUR1Q96AQ8 359 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 RSRC1Q96IZ7 334 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 TEKT5Q96M29 485 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 RBBP8Q99708 897 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 GORASP1Q9BQQ3 440 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 NMUR2Q9GZQ4 415 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 FAM96AQ9H5X1 160 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 STN1Q9H668 368 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 ABCC13Q9NSE7 274 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 C2orf71A6NGG8 1288 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 SEPT4O43236 478 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 TOP3BO95985 862 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 LMNAP02545 664 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 NFKB1P19838 968 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 IBSPP21815 317 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 GRK2P25098 689 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 CD68P34810 354 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 HTR7P34969 479 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 MAP2K2P36507 400 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 CDK7P50613 346 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 NKX3-2P78367 333 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 CDH17Q12864 832 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 OLIG2Q13516 323 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 ANKRD20A4Q4UJ75 823 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 BRMS1LQ5PSV4 323 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 MBLAC2Q68D91 279 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 RWDD4Q6NW29 188 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 C16orf46Q6P387 395 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 ZCCHC23Q6ZST2 131 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 STRA8Q7Z7C7 330 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 TRIB2Q92519 343 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 RILPQ96NA2 401 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 FCRL3Q96P31 734 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 RNPEPL1Q9HAU8 725 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 PPARGC1AQ9UBK2 798 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 MARCOQ9UEW3 520 aaPredicted RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 EMCNQ9ULC0 261 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 C15orf41Q9Y2V0 281 aa11.32□□□□□ -0.6
CMSS1-208ENST00000496116 AAR2Q9Y312 384 aaKnown RBP11.32□□□□□ -0.6
CMSS1-208ENST00000496116 SHROOM3Q8TF72 1996 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 ZCWPW2A0A1B0GU75 182 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 GSC2O15499 205 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 ATP9BO43861 1147 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SERPINE1P05121 402 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SLC10A3P09131 477 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 CTGFP29279 349 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SLC1A6P48664 564 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 LIMK2P53671 638 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 RPL10AP62906 217 aaKnown RBP11.31□□□□□ -0.6
CMSS1-208ENST00000496116 CES4AQ5XG92 561 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 TTC7BQ86TV6 843 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SAPCD2Q86UD0 394 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 KCNMB4Q86W47 210 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 HASPINQ8TF76 798 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SREK1Q8WXA9 508 aaKnown RBP11.31□□□□□ -0.6
CMSS1-208ENST00000496116 RSPH1Q8WYR4 309 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 ISL2Q96A47 359 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 HAPLN3Q96S86 360 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 MIPEPQ99797 713 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 ADAM2Q99965 735 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 MLPHQ9BV36 600 aaPredicted RBP11.31□□□□□ -0.6
CMSS1-208ENST00000496116 CADM1Q9BY67 442 aaKnown RBP11.31□□□□□ -0.6
CMSS1-208ENST00000496116 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 MMADHCQ9H3L0 296 aaPredicted RBP11.31□□□□□ -0.6
CMSS1-208ENST00000496116 CATSPERBQ9H7T0 1116 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SNX15Q9NRS6 342 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 ARHGEF38Q9NXL2 777 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 NSMCE4AQ9NXX6 385 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 COPG2Q9UBF2 871 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 SORCS3Q9UPU3 1222 aa11.31□□□□□ -0.6
CMSS1-208ENST00000496116 INPP5FQ9Y2H2 1132 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms