RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	ENO2	P09104	434 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC7A1	P30825	629 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	MAN1A1	P33908	653 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC11A1	P49279	550 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	CLCN4	P51793	760 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	JAK3	P52333	1124 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	ARFIP2	P53365	341 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	LIMK1	P53667	647 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	MAPK10	P53779	464 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	POLG	P54098	1239 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	GEMIN4	P57678	1058 aa	Known RBP	4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	EVC	P57679	992 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	ERVFRD-1	P60508	538 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	PRR5	P85299	388 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TLE1	Q04724	770 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	CD69	Q07108	199 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	MGAT5	Q09328	741 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	HTR4	Q13639	388 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	BLMH	Q13867	455 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	UBXN2B	Q14CS0	331 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	LETM2	Q2VYF4	491 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	UBXN11	Q5T124	520 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	LRCH2	Q5VUJ6	765 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	PLA2G4F	Q68DD2	849 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TCEAL6	Q6IPX3	200 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	EFCAB12	Q6NXP0	572 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	MZT2A	Q6P582	158 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	CYP26C1	Q6V0L0	522 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	ANO5	Q75V66	913 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TMC6	Q7Z403	805 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	FAM129C	Q86XR2	697 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	GLB1L2	Q8IW92	636 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	ABI1	Q8IZP0	508 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	FAM26E	Q8N5C1	309 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	METTL13	Q8N6R0	699 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	RDM1	Q8NG50	284 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	RSPH1	Q8WYR4	309 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	FGF14	Q92915	247 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	LPP	Q93052	612 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TCEAL3	Q969E4	200 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	CLDN23	Q96B33	292 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	IGSF21	Q96ID5	467 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	HIST1H2AH	Q96KK5	128 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TBATA	Q96M53	351 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	RIT2	Q99578	217 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	HIST1H2AJ	Q99878	128 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	HERC2P3	Q9BVR0	1158 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TMEM120A	Q9BXJ8	343 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	RNF26	Q9BY78	433 aa	Predicted RBP	4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	GLT8D2	Q9H1C3	349 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	ZHX3	Q9H4I2	956 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	NRDE2	Q9H7Z3	1164 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC2A4RG	Q9NR83	387 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	TBC1D22B	Q9NU19	505 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	PNPO	Q9NVS9	261 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	RRN3	Q9NYV6	651 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	VPS54	Q9P1Q0	977 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	MAGEL2	Q9UJ55	1249 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	NUDT5	Q9UKK9	219 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	KLK13	Q9UKR3	277 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	PIN4	Q9Y237	131 aa	Known RBP	4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	PCDHA10	Q9Y5I2	948 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	DOPEY1	Q5JWR5	2465 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	NOTCH4	Q99466	2003 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	ZMYM2	Q9UBW7	1377 aa		4.65	□□□□□ -1.67
VPS52-222	ENST00000495981	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981		A0A087WZ62	844 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981		A0A1W2PPL8	197 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TMEM8B	A6NDV4	472 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	APOL1	O14791	398 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	NCAM2	O15394	837 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	LRP3	O75074	770 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	RFPL2	O75678	378 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	LY86	O95711	162 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TGFB1	P01137	390 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TH	P07101	528 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	GALT	P07902	379 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	H2AFB1	P0C5Y9	115 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	H2AFB2	P0C5Z0	115 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	IFNAR1	P17181	557 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MAL	P21145	153 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SFPQ	P23246	707 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	RPS6KB1	P23443	525 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CYP3A7	P24462	503 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SFN	P31947	248 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	HSPA4	P34932	840 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	NOVA1	P51513	510 aa	Known RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SUMO3	P55854	103 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CD83	Q01151	205 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	DSC1	Q08554	894 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	NFATC3	Q12968	1075 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	TOB2	Q14106	344 aa	Predicted RBP	4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	RTP5	Q14D33	572 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	MST1L	Q2TV78	715 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981		Q4G0T1	1027 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC44A4	Q53GD3	710 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	CCDC157	Q569K6	752 aa		4.64	□□□□□ -1.67
VPS52-222	ENST00000495981	NOMO2	Q5JPE7	1267 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms