RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 WASH4PA8MWX3 477 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PRRT4C9JH25 899 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 ZSCAN12O43309 604 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PSTPIP1O43586 416 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PI15O43692 258 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 ASLP04424 464 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 GOT1P17174 413 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 CSKP41240 450 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PLK1P53350 603 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 SEC13P55735 322 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 SULT2A1Q06520 285 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PLEKHG6Q3KR16 790 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PITRM1Q5JRX3 1037 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 RNF219Q5W0B1 726 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-235ENST00000495515 MBLAC2Q68D91 279 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 SDE2Q6IQ49 451 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 CXorf57Q6NSI4 855 aaKnown RBP17.57■□□□□ 0.4
HDAC6-235ENST00000495515 NLRP14Q86W24 1093 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 ZNF513Q8N8E2 541 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-235ENST00000495515 UBE2Q2Q8WVN8 375 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 EZH1Q92800 747 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-235ENST00000495515 LMLNQ96KR4 655 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 ZNF830Q96NB3 372 aaPredicted RBP17.57■□□□□ 0.4
HDAC6-235ENST00000495515 PCDH18Q9HCL0 1135 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 VPS28Q9UK41 221 aa17.57■□□□□ 0.4
HDAC6-235ENST00000495515 CHURC1-FNTBB4DL54 471 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 RAMP2O60895 175 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 TNNT1P13805 278 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 AVPR2P30518 371 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 KIR2DL1P43626 348 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-235ENST00000495515 C2orf27AQ580R0 203 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 ARTNQ5T4W7 220 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 ADIPOR2Q86V24 386 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 CPNE8Q86YQ8 564 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 SPEM1Q8N4L4 309 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 FAM71BQ8TC56 605 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 USP33Q8TEY7 942 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 TTC17Q96AE7 1141 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 ZNF670Q9BS34 389 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 FEM1AQ9BSK4 669 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 C2orf49Q9BVC5 232 aaPredicted RBP17.56■□□□□ 0.4
HDAC6-235ENST00000495515 CALN1Q9BXU9 219 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 KCNF1Q9H3M0 494 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 LZTFL1Q9NQ48 299 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 CWC15Q9P013 229 aaKnown RBP17.56■□□□□ 0.4
HDAC6-235ENST00000495515 ZNF212Q9UDV6 495 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 TRIM10Q9UDY6 481 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 DNAI1Q9UI46 699 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 NEU3Q9UQ49 428 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 HYOU1Q9Y4L1 999 aa17.56■□□□□ 0.4
HDAC6-235ENST00000495515 LRRD1A4D1F6 860 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 GRID2IPA4D2P6 1211 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 DLDP09622 509 aaKnown RBP17.55■□□□□ 0.4
HDAC6-235ENST00000495515 HNRNPLP14866 589 aaKnown RBP eCLIP17.55■□□□□ 0.4
HDAC6-235ENST00000495515 ERCC2P18074 760 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 TIE1P35590 1138 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 PLA2G5P39877 138 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 NUBP1P53384 320 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 YBEYP58557 167 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-235ENST00000495515 ST8SIA6P61647 398 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 GNA12Q03113 381 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 FUT11Q495W5 492 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 ATP13A4Q4VNC1 1196 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 EOGTQ5NDL2 527 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 PEX26Q7Z412 305 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 VSIG1Q86XK7 387 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 CHPFQ8IZ52 775 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 LZTR1Q8N653 840 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 TMEM105Q8N8V8 129 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 LRRC57Q8N9N7 239 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 RPLP0P6Q8NHW5 317 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 CSPG4P5Q96PW8 444 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 ALS2CR12Q96Q35 445 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 MAGEH1Q9H213 219 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 GOLPH3Q9H4A6 298 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 DLGAP2Q9P1A6 1054 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 AMFRQ9UKV5 643 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 MYOFQ9NZM1 2061 aa17.55■□□□□ 0.4
HDAC6-235ENST00000495515 A0A0U1RQJ8 604 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 CCDC66A2RUB6 948 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 ZNF487B1APH4 448 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 PALMO75781 387 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 KRT1P04264 644 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 KDELR1P24390 212 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 MZF1P28698 734 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-235ENST00000495515 NTSR1P30989 418 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 SERPINB6P35237 376 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 NNMTP40261 264 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 CCR3P51677 355 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 ARSEP51690 589 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 DPYSQ14117 519 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 DPYSL3Q14195 570 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 POLD3Q15054 466 aaPredicted RBP17.54■□□□□ 0.4
HDAC6-235ENST00000495515 EGFLAMQ63HQ2 1017 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 TMEM215Q68D42 235 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 TMCO3Q6UWJ1 677 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 MAMSTRQ6ZN01 415 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 Q6ZS52 159 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 SFTPA1Q8IWL2 248 aa17.54■□□□□ 0.4
HDAC6-235ENST00000495515 APCDD1Q8J025 514 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms