RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ADH1BP00325 375 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 WNT1P04628 370 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 C5AR1P21730 350 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 CCR5P51681 352 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 KCNJ12Q14500 433 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 TAF5Q15542 800 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 GJB7Q6PEY0 223 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 TRIM65Q6PJ69 517 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 SND1Q7KZF4 910 aaKnown RBP eCLIP22.79■■□□□ 1.24
HDDC3-203ENST00000494993 GALNT15Q8N3T1 639 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 SKA1Q96BD8 255 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 FAM81BQ96LP2 452 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 CRACR2AQ9BSW2 395 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 SLC12A6Q9UHW9 1150 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 GPSM3Q9Y4H4 160 aa22.79■■□□□ 1.24
HDDC3-203ENST00000494993 URB1O60287 2271 aaKnown RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 BECN2A8MW95 431 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 PDGFRAP16234 1089 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 GOT1P17174 413 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 NNMTP40261 264 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 ADPRHP54922 357 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 ELAVL3Q14576 367 aaKnown RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 TTC39BQ5VTQ0 682 aaPredicted RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 CIR1Q86X95 450 aaPredicted RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 CCAR2Q8N163 923 aaKnown RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 ELF4Q99607 663 aaPredicted RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 FAM204AQ9H8W3 233 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 AASDHPPTQ9NRN7 309 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 BAHCC1Q9P281 2608 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 FTSJ1Q9UET6 329 aa22.78■■□□□ 1.24
HDDC3-203ENST00000494993 ARID1BQ8NFD5 2236 aaPredicted RBP22.78■■□□□ 1.24
HDDC3-203ENST00000494993 MYLKQ15746 1914 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 A0A1B0GVM2 712 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 TCAF2A6NFQ2 919 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 GADD45BO75293 160 aaPredicted RBP22.77■■□□□ 1.24
HDDC3-203ENST00000494993 SLC2A3P11169 496 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 ABCB4P21439 1286 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 MZF1P28698 734 aaPredicted RBP22.77■■□□□ 1.24
HDDC3-203ENST00000494993 CD38P28907 300 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 NUMBP49757 651 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 PLK1P53350 603 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 CDK17Q00537 523 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 SULT2A1Q06520 285 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 ARHGAP44Q17R89 818 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 RABGAP1LQ5R372 815 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 DEFB106AQ8N104 65 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 OR14C36Q8NHC7 312 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 SLC2A13Q96QE2 648 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 CPXM1Q96SM3 734 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 ASNSD1Q9NWL6 643 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 DDIT4Q9NX09 232 aa22.77■■□□□ 1.24
HDDC3-203ENST00000494993 TPX2Q9ULW0 747 aaKnown RBP22.77■■□□□ 1.24
HDDC3-203ENST00000494993 CELSR3Q9NYQ7 3312 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 SYNJ2BP-COX16A0A087WUM0 186 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 A0A1W2PR77 199 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 IL1BP01584 269 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 GLI1P08151 1106 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 VAV1P15498 845 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 SLC9A1P19634 815 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 CCR1P32246 355 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 DRD3P35462 400 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 USP8P40818 1118 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 SMAD1Q15797 465 aaKnown RBP22.76■■□□□ 1.23
HDDC3-203ENST00000494993 PRAMEF14Q5SWL7 426 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 CXorf57Q6NSI4 855 aaKnown RBP22.76■■□□□ 1.23
HDDC3-203ENST00000494993 MARCH9Q86YJ5 346 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 GATAD2AQ86YP4 633 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 WDTC1Q8N5D0 677 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 FRS2Q8WU20 508 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 COX16Q9P0S2 106 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 DKK4Q9UBT3 224 aa22.76■■□□□ 1.23
HDDC3-203ENST00000494993 WNT9AO14904 365 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 HSF2BPO75031 334 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 OXCT1P55809 520 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 CCDC157Q569K6 752 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 EFHC1Q5JVL4 640 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 FBXL22Q6P050 247 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 C19orf48Q6RUI8 117 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 GBP6Q6ZN66 633 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 SHC3Q92529 594 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 RNF34Q969K3 372 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 SERAC1Q96JX3 654 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 PPP1R13BQ96KQ4 1090 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 SPAG5Q96R06 1193 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 APEX2Q9UBZ4 518 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 RWDD2AQ9UIY3 292 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 PCDHGC3Q9UN70 934 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 DOCK4Q8N1I0 1966 aa22.75■■□□□ 1.23
HDDC3-203ENST00000494993 VASPP50552 380 aaPredicted RBP22.74■■□□□ 1.23
HDDC3-203ENST00000494993 PPP2CBP62714 309 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 PPP2CAP67775 309 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 APBA1Q02410 837 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 CENPCQ03188 943 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 CAMK2BQ13554 666 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 SHBQ15464 509 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 DHRS13Q6UX07 377 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 CREBRFQ8IUR6 639 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 PASD1Q8IV76 773 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 FAM131CQ96AQ9 280 aa22.74■■□□□ 1.23
HDDC3-203ENST00000494993 RPRD1AQ96P16 312 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms