RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	ITPRIPL2	Q3MIP1	535 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	ALF	Q53S48	1182 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	LY6G5C	Q5SRR4	150 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	TMCO4	Q5TGY1	634 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	FYB2	Q5VWT5	728 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	CCDC70	Q6NSX1	233 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	AADACL2	Q6P093	401 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	TPGS1	Q6ZTW0	290 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	TFAP2D	Q7Z6R9	452 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	METTL3	Q86U44	580 aa	Known RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	ADHFE1	Q8IWW8	467 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	SUGP1	Q8IWZ8	645 aa	Known RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	CARNMT1	Q8N4J0	409 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	ATPAF2	Q8N5M1	289 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	FIBIN	Q8TAL6	211 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	WFIKKN2	Q8TEU8	576 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	NSMCE1	Q8WV22	266 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.9	□□□□□ -0.18
APTX-231	ENST00000494973	HDAC11	Q96DB2	347 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	ECT2	Q9H8V3	914 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	HPCAL4	Q9UM19	191 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	HEY1	Q9Y5J3	304 aa		13.9	□□□□□ -0.18
APTX-231	ENST00000494973	LOC730098	B7Z3J9	87 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	SCAMP3	O14828	347 aa	Known RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	CNTN5	O94779	1100 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	EIF3E	P60228	445 aa	Known RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	OTUD4	Q01804	1114 aa	Known RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	GNA12	Q03113	381 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	BYSL	Q13895	437 aa	Known RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	GRM2	Q14416	872 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	POLD3	Q15054	466 aa	Predicted RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	AFMID	Q63HM1	303 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	RHBDF2	Q6PJF5	856 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	TMEM25	Q86YD3	366 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	CFAP52	Q8N1V2	620 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	ACTL9	Q8TC94	416 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	CCHCR1	Q8TD31	782 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	TFB1M	Q8WVM0	346 aa	Known RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	FATE1	Q969F0	183 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	NKD2	Q969F2	451 aa	Predicted RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	MS4A14	Q96JA4	679 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	OLFM3	Q96PB7	478 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	LRRC3B	Q96PB8	259 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.89	□□□□□ -0.19
APTX-231	ENST00000494973	MAGEB5	Q9BZ81	275 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	MUC3B	Q9H195	1237 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	EBF3	Q9H4W6	596 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	LRRC19	Q9H756	370 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	DTL	Q9NZJ0	730 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973	ZNF212	Q9UDV6	495 aa		13.89	□□□□□ -0.19
APTX-231	ENST00000494973		H7C0C1	242 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	TRDMT1	O14717	391 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	LIAS	O43766	372 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	GAS8	O95995	478 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	GLUL	P15104	373 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	STIP1	P31948	543 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	GARS	P41250	739 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	ATP5O	P48047	213 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	PLK1	P53350	603 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	GBE1	Q04446	702 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	SULT2A1	Q06520	285 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	SLC45A4	Q5BKX6	768 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	HEATR6	Q6AI08	1181 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	CXorf57	Q6NSI4	855 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	ANKS1B	Q7Z6G8	1248 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	AHI1	Q8N157	1196 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	BBS5	Q8N3I7	341 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	DCAF4L2	Q8NA75	395 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	SPATA4	Q8NEY3	305 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	CCDC26	Q8TAB7	109 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	SLC35B2	Q8TB61	432 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	MAGOHB	Q96A72	148 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	ACD	Q96AP0	544 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	TSGA13	Q96PP4	275 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	VAT1	Q99536	393 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	LINC00597	Q9H2U6	94 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	KCNK12	Q9HB15	430 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	SP110	Q9HB58	689 aa		13.88	□□□□□ -0.19
APTX-231	ENST00000494973	DRG1	Q9Y295	367 aa	Known RBP	13.88	□□□□□ -0.19
APTX-231	ENST00000494973	RASA4B	C9J798	803 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	DFFA	O00273	331 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	NDC80	O14777	642 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	RASA4	O43374	803 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ITGAV	P06756	1048 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	RBP3	P10745	1247 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	IL9	P15248	144 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	PECAM1	P16284	738 aa	Predicted RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	SP100	P23497	879 aa	Predicted RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	CCNC	P24863	283 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	ACTN2	P35609	894 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	DGKG	P49619	791 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	IRAK1	P51617	712 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	SGSH	P51688	502 aa		13.87	□□□□□ -0.19
APTX-231	ENST00000494973	PPID	Q08752	370 aa	Known RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	DHX34	Q14147	1143 aa	Known RBP	13.87	□□□□□ -0.19
APTX-231	ENST00000494973	RFTN1	Q14699	578 aa	Predicted RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms